Top 10 genes with highest correlation to Rv0618/galTa:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0149/- | (cc=0.4613) | info on Rv0149/- |
| Rv2129c/- | (cc=0.4593) | info on Rv2129c/- |
| Rv0492c/- | (cc=0.4553) | info on Rv0492c/- |
| Rv2734/- | (cc=0.4515) | info on Rv2734/- |
| Rv2389c/rpfD | (cc=0.4491) | info on Rv2389c/rpfD |
| Rv0036c/- | (cc=0.425) | info on Rv0036c/- |
| Rv1949c/- | (cc=0.4192) | info on Rv1949c/- |
| Rv3705c/- | (cc=0.4104) | info on Rv3705c/- |
| Rv0408/pta | (cc=0.405) | info on Rv0408/pta |
| Rv0085/hycP | (cc=0.4043) | info on Rv0085/hycP |
Correlation of Rv0618/galTa with Rv0036c/-
Normalized LFCs for Rv0618/galTa:
(description and provenance of datasets)
| Rv0618/galTa | Rv0036c/- | |
| Fe_supp_jason_reseq | 1.384 | -0.346 |
| low_pH_jason_reseq | -0.788 | -1.297 |
| NO_jason_reseq | 1.121 | 0.202 |
| B6_jason_reseq | -1.428 | 0.25 |
| MHCII_jason_reseq | 0.111 | 0.134 |
| Isoniazid02 | 0.202 | 0.652 |
| Rifampicin4 | 0.596 | 0.717 |
| Ethambutol3 | 0.914 | 1.378 |
| Meropenem3 | 2.086 | 0.537 |
| Vancomycin16 | 0.785 | 0.873 |
| Rv2680_day32 | 0.0 | -3.314 |
| H37Rv_KO_MarP | 1.023 | 0.148 |
| hypoxia_3wks | -0.658 | 0.463 |
| hypoxia_6wks | -0.532 | -0.969 |
| glycerol | 1.442 | 1.205 |
| cholesterol | -0.03 | 0.106 |
| AJ | -1.368 | 0.304 |
| Bibs02 | -0.513 | 0.229 |
| Bibs02c | 0.427 | 0.653 |
| BL6 | -0.53 | -1.378 |
| BL6a | -0.169 | -0.296 |
| BXD01 | 1.083 | -1.055 |
| BXD010 | -0.054 | -1.216 |
| BXD011 | 0.238 | 0.465 |
| BXD03 | -0.241 | -1.212 |
| BXD04 | 1.268 | -0.4 |
| BXD05 | -0.341 | -0.13 |
| BXD06 | 0.203 | -0.199 |
| BXD07 | 0.082 | -0.133 |
| BXD08 | -0.446 | -0.436 |
| BXD09 | 0.526 | -0.657 |
| CAST | -0.302 | -0.901 |
| CCcont | -0.936 | -1.863 |
| DS01 | 0.186 | 0.375 |
| DS02 | -0.336 | 0.403 |
| DS04 | -1.29 | -0.18 |
| DS0c | -0.284 | -0.38 |
| GP01 | 2.161 | 1.587 |
| GP02 | 0.156 | 0.505 |
| GP0c | 1.475 | 0.469 |
| NOD | -1.674 | -0.633 |
| NZO | -0.308 | -0.22 |
| PWK | -2.136 | 0.47 |
| H37Rv_KO_CtpC | -0.068 | -0.298 |
| H37Rv_KO_CtpD | 0.781 | -0.256 |
| H37Rv_KO_Rv1272 | 0.445 | -0.716 |
| H37Rv_KO_SugABC | 0.851 | 0.088 |
| H37Rv_KO_MbtN | 1.755 | 0.111 |
| Trans05 | 1.168 | 0.164 |
| macrophage_unactivated | -0.079 | -0.3 |
| IL1 | 1.376 | -0.599 |
| Rapamycin | 0.365 | 0.681 |
| Tcell | 0.081 | -1.111 |
| GMCSF | 1.41 | 0.945 |
| IFNab | -0.233 | 0.033 |
| IFNg | 0.78 | -0.834 |
| IFNg_GMCSF1 | 0.446 | 0.493 |
| Rv1432_day32 | 1.356 | 0.379 |
| Rv1565c_day32 | 0.0 | 0.479 |
| secA2_input | -0.487 | 0.459 |
| delta_Rv3594 | -0.555 | 0.33 |
| delta_Rv3717 | 0.419 | 0.886 |
| delta_Rv3811 | 0.077 | -0.159 |
| delta_Rv0954 | 0.823 | 1.416 |
| PonA1 | -0.871 | 0.263 |
| EccD1_KO | 0.227 | -0.082 |
| EspI_KO | -0.068 | -1.112 |
| PE35_KO | -0.592 | 0.365 |
| PPE68_KO | -0.563 | 0.49 |
| glycerol2 | -1.24 | -0.376 |
| lignocerate | -0.826 | -1.436 |
| oleate | 0.021 | -0.451 |
| phosphatidylcholine | 0.083 | -0.784 |
| acetate | -1.872 | -2.018 |
| glucAc | -2.672 | -2.881 |
| Rv0950ko | -0.582 | 0.075 |
| Rv1096ko | -0.763 | -0.178 |
| Rv3684ko | 2.24 | 0.285 |
| delta_otsA_trehalose | 0.623 | 0.786 |