Top 10 genes with highest correlation to Rv0618/galTa:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0149/- | (cc=0.4613) | info on Rv0149/- |
| Rv2129c/- | (cc=0.4593) | info on Rv2129c/- |
| Rv0492c/- | (cc=0.4553) | info on Rv0492c/- |
| Rv2734/- | (cc=0.4515) | info on Rv2734/- |
| Rv2389c/rpfD | (cc=0.4491) | info on Rv2389c/rpfD |
| Rv0036c/- | (cc=0.425) | info on Rv0036c/- |
| Rv1949c/- | (cc=0.4192) | info on Rv1949c/- |
| Rv3705c/- | (cc=0.4104) | info on Rv3705c/- |
| Rv0408/pta | (cc=0.405) | info on Rv0408/pta |
| Rv0085/hycP | (cc=0.4043) | info on Rv0085/hycP |
Correlation of Rv0618/galTa with Rv0408/pta
Normalized LFCs for Rv0618/galTa:
(description and provenance of datasets)
| Rv0618/galTa | Rv0408/pta | |
| Fe_supp_jason_reseq | 1.384 | 0.276 |
| low_pH_jason_reseq | -0.788 | -0.883 |
| NO_jason_reseq | 1.121 | 0.294 |
| B6_jason_reseq | -1.428 | 0.026 |
| MHCII_jason_reseq | 0.111 | -0.221 |
| Isoniazid02 | 0.202 | -0.081 |
| Rifampicin4 | 0.596 | -0.761 |
| Ethambutol3 | 0.914 | -0.068 |
| Meropenem3 | 2.086 | 0.588 |
| Vancomycin16 | 0.785 | -0.098 |
| Rv2680_day32 | 0.0 | -0.238 |
| H37Rv_KO_MarP | 1.023 | 0.087 |
| hypoxia_3wks | -0.658 | -0.399 |
| hypoxia_6wks | -0.532 | -1.8 |
| glycerol | 1.442 | 1.066 |
| cholesterol | -0.03 | 0.54 |
| AJ | -1.368 | -1.239 |
| Bibs02 | -0.513 | 0.081 |
| Bibs02c | 0.427 | 0.121 |
| BL6 | -0.53 | -0.246 |
| BL6a | -0.169 | 0.143 |
| BXD01 | 1.083 | -0.601 |
| BXD010 | -0.054 | -0.478 |
| BXD011 | 0.238 | 0.11 |
| BXD03 | -0.241 | -0.126 |
| BXD04 | 1.268 | 0.156 |
| BXD05 | -0.341 | -0.041 |
| BXD06 | 0.203 | 0.319 |
| BXD07 | 0.082 | -0.152 |
| BXD08 | -0.446 | -0.524 |
| BXD09 | 0.526 | -0.064 |
| CAST | -0.302 | -0.716 |
| CCcont | -0.936 | -0.045 |
| DS01 | 0.186 | 0.171 |
| DS02 | -0.336 | 0.545 |
| DS04 | -1.29 | -0.03 |
| DS0c | -0.284 | -0.066 |
| GP01 | 2.161 | 0.293 |
| GP02 | 0.156 | 0.668 |
| GP0c | 1.475 | 0.232 |
| NOD | -1.674 | -0.936 |
| NZO | -0.308 | -1.568 |
| PWK | -2.136 | -0.183 |
| H37Rv_KO_CtpC | -0.068 | 0.329 |
| H37Rv_KO_CtpD | 0.781 | 0.982 |
| H37Rv_KO_Rv1272 | 0.445 | -0.495 |
| H37Rv_KO_SugABC | 0.851 | 0.283 |
| H37Rv_KO_MbtN | 1.755 | 0.426 |
| Trans05 | 1.168 | -0.188 |
| macrophage_unactivated | -0.079 | -0.442 |
| IL1 | 1.376 | -0.225 |
| Rapamycin | 0.365 | -0.046 |
| Tcell | 0.081 | -0.098 |
| GMCSF | 1.41 | -0.161 |
| IFNab | -0.233 | 0.175 |
| IFNg | 0.78 | 0.118 |
| IFNg_GMCSF1 | 0.446 | -0.99 |
| Rv1432_day32 | 1.356 | -0.849 |
| Rv1565c_day32 | 0.0 | 0.028 |
| secA2_input | -0.487 | 0.388 |
| delta_Rv3594 | -0.555 | 0.124 |
| delta_Rv3717 | 0.419 | -0.081 |
| delta_Rv3811 | 0.077 | 0.29 |
| delta_Rv0954 | 0.823 | -0.027 |
| PonA1 | -0.871 | 0.617 |
| EccD1_KO | 0.227 | 0.148 |
| EspI_KO | -0.068 | -0.362 |
| PE35_KO | -0.592 | 0.461 |
| PPE68_KO | -0.563 | 0.419 |
| glycerol2 | -1.24 | -0.317 |
| lignocerate | -0.826 | -0.746 |
| oleate | 0.021 | 0.078 |
| phosphatidylcholine | 0.083 | -0.331 |
| acetate | -1.872 | -1.19 |
| glucAc | -2.672 | -1.681 |
| Rv0950ko | -0.582 | 0.247 |
| Rv1096ko | -0.763 | 0.7 |
| Rv3684ko | 2.24 | 0.472 |
| delta_otsA_trehalose | 0.623 | 0.622 |