Top 10 genes with highest correlation to Rv0595c/vapC4:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0433/- | (cc=0.6188) | info on Rv0433/- |
| Rv0691A/- | (cc=0.5811) | info on Rv0691A/- |
| Rv2727c/miaA | (cc=0.5776) | info on Rv2727c/miaA |
| Rv0228/- | (cc=0.5775) | info on Rv0228/- |
| Rv1323/fadA4 | (cc=0.566) | info on Rv1323/fadA4 |
| Rv0841/- | (cc=0.558) | info on Rv0841/- |
| Rv0857/- | (cc=0.5343) | info on Rv0857/- |
| Rv1999c/- | (cc=0.5309) | info on Rv1999c/- |
| Rv2028c/- | (cc=0.5295) | info on Rv2028c/- |
| Rv3746c/PE34 | (cc=0.5257) | info on Rv3746c/PE34 |
Correlation of Rv0595c/vapC4 with Rv0857/-
Normalized LFCs for Rv0595c/vapC4:
(description and provenance of datasets)
| Rv0595c/vapC4 | Rv0857/- | |
| Fe_supp_jason_reseq | 0.952 | -0.186 |
| low_pH_jason_reseq | 0.918 | 0.303 |
| NO_jason_reseq | 0.522 | 0.593 |
| B6_jason_reseq | 1.072 | 0.347 |
| MHCII_jason_reseq | -0.694 | -0.808 |
| Isoniazid02 | 0.073 | -0.803 |
| Rifampicin4 | 0.417 | -0.363 |
| Ethambutol3 | 0.579 | 1.409 |
| Meropenem3 | 0.57 | -0.214 |
| Vancomycin16 | 0.645 | -0.337 |
| Rv2680_day32 | 1.429 | -0.223 |
| H37Rv_KO_MarP | 0.415 | 0.261 |
| hypoxia_3wks | -0.299 | -0.905 |
| hypoxia_6wks | -0.319 | -1.232 |
| glycerol | -0.091 | -1.783 |
| cholesterol | -0.049 | -0.515 |
| AJ | 0.114 | 0.884 |
| Bibs02 | -0.607 | -0.766 |
| Bibs02c | -0.834 | 0.095 |
| BL6 | -1.475 | -0.497 |
| BL6a | -2.101 | -0.994 |
| BXD01 | -2.684 | -2.127 |
| BXD010 | -0.361 | -1.038 |
| BXD011 | -1.833 | -1.623 |
| BXD03 | -1.16 | -1.843 |
| BXD04 | -1.763 | -1.355 |
| BXD05 | -1.799 | -1.698 |
| BXD06 | -2.013 | -1.767 |
| BXD07 | -1.722 | -1.434 |
| BXD08 | -1.214 | -1.778 |
| BXD09 | -1.599 | -1.773 |
| CAST | -0.023 | 0.113 |
| CCcont | -1.464 | -1.27 |
| DS01 | -0.157 | -0.506 |
| DS02 | -0.307 | -0.088 |
| DS04 | -1.62 | -0.918 |
| DS0c | -1.315 | -0.096 |
| GP01 | 0.821 | -0.949 |
| GP02 | -0.134 | -1.704 |
| GP0c | 0.056 | -0.615 |
| NOD | -0.343 | 2.193 |
| NZO | -0.376 | 0.118 |
| PWK | -0.277 | -0.021 |
| H37Rv_KO_CtpC | -1.097 | -0.414 |
| H37Rv_KO_CtpD | 0.059 | -0.537 |
| H37Rv_KO_Rv1272 | -0.872 | -2.21 |
| H37Rv_KO_SugABC | 0.347 | 0.282 |
| H37Rv_KO_MbtN | -1.511 | -1.288 |
| Trans05 | 0.223 | -1.292 |
| macrophage_unactivated | -0.467 | -1.641 |
| IL1 | -1.486 | -0.133 |
| Rapamycin | -0.034 | -0.807 |
| Tcell | -0.036 | -0.3 |
| GMCSF | 0.277 | -0.898 |
| IFNab | -0.203 | -0.366 |
| IFNg | -0.949 | -0.647 |
| IFNg_GMCSF1 | 0.0 | -1.213 |
| Rv1432_day32 | -0.838 | -1.92 |
| Rv1565c_day32 | -0.098 | -0.447 |
| secA2_input | 0.585 | -0.102 |
| delta_Rv3594 | 0.515 | -0.092 |
| delta_Rv3717 | 0.305 | -0.629 |
| delta_Rv3811 | 0.333 | 0.697 |
| delta_Rv0954 | 0.509 | 0.672 |
| PonA1 | 0.14 | -0.196 |
| EccD1_KO | -0.957 | -0.082 |
| EspI_KO | 0.399 | -0.53 |
| PE35_KO | -0.023 | -0.974 |
| PPE68_KO | -0.813 | 0.106 |
| glycerol2 | 0.0 | 0.397 |
| lignocerate | 0.198 | 0.127 |
| oleate | 0.421 | 0.967 |
| phosphatidylcholine | -0.387 | 1.056 |
| acetate | 0.514 | 0.0 |
| glucAc | 0.345 | -0.349 |
| Rv0950ko | -0.244 | -0.244 |
| Rv1096ko | 0.477 | 0.296 |
| Rv3684ko | 0.517 | -0.809 |
| delta_otsA_trehalose | 1.251 | 0.193 |