Top 10 genes with highest correlation to Rv0595c/vapC4:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0433/- | (cc=0.6188) | info on Rv0433/- |
| Rv0691A/- | (cc=0.5811) | info on Rv0691A/- |
| Rv2727c/miaA | (cc=0.5776) | info on Rv2727c/miaA |
| Rv0228/- | (cc=0.5775) | info on Rv0228/- |
| Rv1323/fadA4 | (cc=0.566) | info on Rv1323/fadA4 |
| Rv0841/- | (cc=0.558) | info on Rv0841/- |
| Rv0857/- | (cc=0.5343) | info on Rv0857/- |
| Rv1999c/- | (cc=0.5309) | info on Rv1999c/- |
| Rv2028c/- | (cc=0.5295) | info on Rv2028c/- |
| Rv3746c/PE34 | (cc=0.5257) | info on Rv3746c/PE34 |
Correlation of Rv0595c/vapC4 with Rv0691A/-
Normalized LFCs for Rv0595c/vapC4:
(description and provenance of datasets)
| Rv0595c/vapC4 | Rv0691A/- | |
| Fe_supp_jason_reseq | 0.952 | 1.449 |
| low_pH_jason_reseq | 0.918 | -1.188 |
| NO_jason_reseq | 0.522 | 0.0 |
| B6_jason_reseq | 1.072 | 1.554 |
| MHCII_jason_reseq | -0.694 | 0.545 |
| Isoniazid02 | 0.073 | 0.084 |
| Rifampicin4 | 0.417 | 0.344 |
| Ethambutol3 | 0.579 | 0.326 |
| Meropenem3 | 0.57 | 0.476 |
| Vancomycin16 | 0.645 | 0.992 |
| Rv2680_day32 | 1.429 | 0.0 |
| H37Rv_KO_MarP | 0.415 | -0.243 |
| hypoxia_3wks | -0.299 | -0.678 |
| hypoxia_6wks | -0.319 | 1.733 |
| glycerol | -0.091 | -0.023 |
| cholesterol | -0.049 | -2.556 |
| AJ | 0.114 | 0.077 |
| Bibs02 | -0.607 | -4.059 |
| Bibs02c | -0.834 | -2.176 |
| BL6 | -1.475 | -2.901 |
| BL6a | -2.101 | -2.87 |
| BXD01 | -2.684 | -3.021 |
| BXD010 | -0.361 | -2.971 |
| BXD011 | -1.833 | -1.044 |
| BXD03 | -1.16 | -3.137 |
| BXD04 | -1.763 | -1.684 |
| BXD05 | -1.799 | -2.987 |
| BXD06 | -2.013 | -2.441 |
| BXD07 | -1.722 | -2.443 |
| BXD08 | -1.214 | -3.085 |
| BXD09 | -1.599 | -3.26 |
| CAST | -0.023 | -2.396 |
| CCcont | -1.464 | -2.233 |
| DS01 | -0.157 | -2.057 |
| DS02 | -0.307 | 0.733 |
| DS04 | -1.62 | -0.441 |
| DS0c | -1.315 | -1.383 |
| GP01 | 0.821 | 0.837 |
| GP02 | -0.134 | -0.584 |
| GP0c | 0.056 | 1.651 |
| NOD | -0.343 | -2.203 |
| NZO | -0.376 | -1.313 |
| PWK | -0.277 | -0.186 |
| H37Rv_KO_CtpC | -1.097 | -3.458 |
| H37Rv_KO_CtpD | 0.059 | 0.448 |
| H37Rv_KO_Rv1272 | -0.872 | -0.899 |
| H37Rv_KO_SugABC | 0.347 | -2.298 |
| H37Rv_KO_MbtN | -1.511 | -2.108 |
| Trans05 | 0.223 | 0.677 |
| macrophage_unactivated | -0.467 | 2.273 |
| IL1 | -1.486 | 0.475 |
| Rapamycin | -0.034 | -0.267 |
| Tcell | -0.036 | -0.59 |
| GMCSF | 0.277 | -1.658 |
| IFNab | -0.203 | -0.263 |
| IFNg | -0.949 | -2.047 |
| IFNg_GMCSF1 | 0.0 | -0.569 |
| Rv1432_day32 | -0.838 | -0.155 |
| Rv1565c_day32 | -0.098 | 0.0 |
| secA2_input | 0.585 | -2.376 |
| delta_Rv3594 | 0.515 | 0.453 |
| delta_Rv3717 | 0.305 | 0.593 |
| delta_Rv3811 | 0.333 | 0.781 |
| delta_Rv0954 | 0.509 | 1.156 |
| PonA1 | 0.14 | 2.278 |
| EccD1_KO | -0.957 | -1.901 |
| EspI_KO | 0.399 | -1.968 |
| PE35_KO | -0.023 | -2.08 |
| PPE68_KO | -0.813 | -1.648 |
| glycerol2 | 0.0 | 1.073 |
| lignocerate | 0.198 | 0.32 |
| oleate | 0.421 | 0.0 |
| phosphatidylcholine | -0.387 | 0.819 |
| acetate | 0.514 | 0.0 |
| glucAc | 0.345 | 1.367 |
| Rv0950ko | -0.244 | -0.241 |
| Rv1096ko | 0.477 | -0.7 |
| Rv3684ko | 0.517 | 1.028 |
| delta_otsA_trehalose | 1.251 | 0.742 |