Top 10 genes with highest correlation to Rv0595c/vapC4:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0433/- | (cc=0.6188) | info on Rv0433/- |
| Rv0691A/- | (cc=0.5811) | info on Rv0691A/- |
| Rv2727c/miaA | (cc=0.5776) | info on Rv2727c/miaA |
| Rv0228/- | (cc=0.5775) | info on Rv0228/- |
| Rv1323/fadA4 | (cc=0.566) | info on Rv1323/fadA4 |
| Rv0841/- | (cc=0.558) | info on Rv0841/- |
| Rv0857/- | (cc=0.5343) | info on Rv0857/- |
| Rv1999c/- | (cc=0.5309) | info on Rv1999c/- |
| Rv2028c/- | (cc=0.5295) | info on Rv2028c/- |
| Rv3746c/PE34 | (cc=0.5257) | info on Rv3746c/PE34 |
Correlation of Rv0595c/vapC4 with Rv0433/-
Normalized LFCs for Rv0595c/vapC4:
(description and provenance of datasets)
| Rv0595c/vapC4 | Rv0433/- | |
| Fe_supp_jason_reseq | 0.952 | -0.808 |
| low_pH_jason_reseq | 0.918 | 0.604 |
| NO_jason_reseq | 0.522 | 0.977 |
| B6_jason_reseq | 1.072 | 0.47 |
| MHCII_jason_reseq | -0.694 | 0.222 |
| Isoniazid02 | 0.073 | 0.29 |
| Rifampicin4 | 0.417 | 0.022 |
| Ethambutol3 | 0.579 | 1.661 |
| Meropenem3 | 0.57 | 0.376 |
| Vancomycin16 | 0.645 | 0.218 |
| Rv2680_day32 | 1.429 | 0.04 |
| H37Rv_KO_MarP | 0.415 | 0.0 |
| hypoxia_3wks | -0.299 | -0.084 |
| hypoxia_6wks | -0.319 | 0.33 |
| glycerol | -0.091 | -0.557 |
| cholesterol | -0.049 | 1.309 |
| AJ | 0.114 | -0.899 |
| Bibs02 | -0.607 | -1.151 |
| Bibs02c | -0.834 | -1.075 |
| BL6 | -1.475 | -1.407 |
| BL6a | -2.101 | -1.629 |
| BXD01 | -2.684 | -1.696 |
| BXD010 | -0.361 | -1.654 |
| BXD011 | -1.833 | -1.023 |
| BXD03 | -1.16 | -1.521 |
| BXD04 | -1.763 | -1.371 |
| BXD05 | -1.799 | -0.869 |
| BXD06 | -2.013 | -1.49 |
| BXD07 | -1.722 | -0.887 |
| BXD08 | -1.214 | -1.173 |
| BXD09 | -1.599 | -1.4 |
| CAST | -0.023 | -0.409 |
| CCcont | -1.464 | -2.189 |
| DS01 | -0.157 | -1.104 |
| DS02 | -0.307 | -0.692 |
| DS04 | -1.62 | -1.57 |
| DS0c | -1.315 | -1.436 |
| GP01 | 0.821 | 0.048 |
| GP02 | -0.134 | -1.419 |
| GP0c | 0.056 | -1.485 |
| NOD | -0.343 | -0.163 |
| NZO | -0.376 | -0.968 |
| PWK | -0.277 | -0.72 |
| H37Rv_KO_CtpC | -1.097 | -1.254 |
| H37Rv_KO_CtpD | 0.059 | -0.007 |
| H37Rv_KO_Rv1272 | -0.872 | -0.411 |
| H37Rv_KO_SugABC | 0.347 | -0.401 |
| H37Rv_KO_MbtN | -1.511 | -0.052 |
| Trans05 | 0.223 | -0.683 |
| macrophage_unactivated | -0.467 | -1.632 |
| IL1 | -1.486 | -0.039 |
| Rapamycin | -0.034 | -1.267 |
| Tcell | -0.036 | -0.407 |
| GMCSF | 0.277 | -0.613 |
| IFNab | -0.203 | -0.42 |
| IFNg | -0.949 | -0.208 |
| IFNg_GMCSF1 | 0.0 | -0.245 |
| Rv1432_day32 | -0.838 | -0.464 |
| Rv1565c_day32 | -0.098 | -0.041 |
| secA2_input | 0.585 | 0.089 |
| delta_Rv3594 | 0.515 | 0.864 |
| delta_Rv3717 | 0.305 | 0.893 |
| delta_Rv3811 | 0.333 | 0.763 |
| delta_Rv0954 | 0.509 | 1.151 |
| PonA1 | 0.14 | 0.72 |
| EccD1_KO | -0.957 | -0.931 |
| EspI_KO | 0.399 | -0.505 |
| PE35_KO | -0.023 | -1.105 |
| PPE68_KO | -0.813 | -0.541 |
| glycerol2 | 0.0 | -0.261 |
| lignocerate | 0.198 | -0.054 |
| oleate | 0.421 | 0.427 |
| phosphatidylcholine | -0.387 | 0.714 |
| acetate | 0.514 | -0.366 |
| glucAc | 0.345 | -0.539 |
| Rv0950ko | -0.244 | -0.096 |
| Rv1096ko | 0.477 | -0.223 |
| Rv3684ko | 0.517 | 0.305 |
| delta_otsA_trehalose | 1.251 | -0.056 |