Top 10 genes with highest correlation to Rv0590/mce2B:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1153c/omt | (cc=0.5438) | info on Rv1153c/omt |
| Rv2689c/- | (cc=0.453) | info on Rv2689c/- |
| Rv0442c/PPE10 | (cc=0.4458) | info on Rv0442c/PPE10 |
| Rv1001/arcA | (cc=0.4333) | info on Rv1001/arcA |
| Rv0030/- | (cc=0.4276) | info on Rv0030/- |
| Rv0958/- | (cc=0.4067) | info on Rv0958/- |
| Rv2756c/hsdM | (cc=0.3986) | info on Rv2756c/hsdM |
| Rv0591/mce2C | (cc=0.3969) | info on Rv0591/mce2C |
| Rv0698/- | (cc=0.3943) | info on Rv0698/- |
| Rv2407/- | (cc=0.3892) | info on Rv2407/- |
Correlation of Rv0590/mce2B with Rv2407/-
Normalized LFCs for Rv0590/mce2B:
(description and provenance of datasets)
| Rv0590/mce2B | Rv2407/- | |
| Fe_supp_jason_reseq | -2.234 | -0.867 |
| low_pH_jason_reseq | 0.918 | -0.539 |
| NO_jason_reseq | 0.614 | 0.071 |
| B6_jason_reseq | -2.589 | -0.483 |
| MHCII_jason_reseq | -1.251 | 0.108 |
| Isoniazid02 | 0.713 | 0.54 |
| Rifampicin4 | -0.791 | 0.154 |
| Ethambutol3 | -0.422 | 1.069 |
| Meropenem3 | -0.399 | 0.627 |
| Vancomycin16 | -0.6 | 0.608 |
| Rv2680_day32 | -0.828 | 0.851 |
| H37Rv_KO_MarP | -0.175 | -0.535 |
| hypoxia_3wks | -0.586 | -0.152 |
| hypoxia_6wks | -0.361 | -0.04 |
| glycerol | -0.193 | -0.118 |
| cholesterol | 0.073 | -0.351 |
| AJ | 0.203 | -0.437 |
| Bibs02 | 1.084 | 0.427 |
| Bibs02c | -0.859 | -0.3 |
| BL6 | -0.614 | -0.334 |
| BL6a | -0.399 | -0.433 |
| BXD01 | 0.05 | -0.348 |
| BXD010 | 0.128 | 0.124 |
| BXD011 | -0.236 | -0.259 |
| BXD03 | -0.054 | -0.135 |
| BXD04 | 0.047 | -1.257 |
| BXD05 | 0.984 | 0.107 |
| BXD06 | -0.473 | -0.532 |
| BXD07 | -0.152 | -0.1 |
| BXD08 | -0.447 | 0.175 |
| BXD09 | -0.095 | 0.192 |
| CAST | 0.23 | 0.128 |
| CCcont | -0.04 | -0.424 |
| DS01 | -0.294 | -0.373 |
| DS02 | 0.164 | -0.249 |
| DS04 | 0.682 | 0.492 |
| DS0c | 0.217 | -0.526 |
| GP01 | -0.425 | 1.309 |
| GP02 | 0.052 | -0.195 |
| GP0c | 0.68 | 0.276 |
| NOD | 0.853 | 1.054 |
| NZO | -0.402 | 0.217 |
| PWK | 0.148 | 0.098 |
| H37Rv_KO_CtpC | 0.379 | -0.14 |
| H37Rv_KO_CtpD | 0.796 | 0.537 |
| H37Rv_KO_Rv1272 | 0.106 | -0.037 |
| H37Rv_KO_SugABC | 1.642 | 0.897 |
| H37Rv_KO_MbtN | -1.093 | -0.125 |
| Trans05 | -1.339 | 0.414 |
| macrophage_unactivated | 0.133 | -0.716 |
| IL1 | -0.756 | -0.353 |
| Rapamycin | 0.252 | -0.15 |
| Tcell | 0.137 | -0.189 |
| GMCSF | -0.478 | -0.428 |
| IFNab | 0.308 | -0.423 |
| IFNg | 0.166 | 0.174 |
| IFNg_GMCSF1 | 0.848 | 0.456 |
| Rv1432_day32 | 1.043 | 0.623 |
| Rv1565c_day32 | -0.607 | 0.33 |
| secA2_input | -0.398 | 1.647 |
| delta_Rv3594 | -0.791 | -0.168 |
| delta_Rv3717 | -0.715 | 0.011 |
| delta_Rv3811 | 0.378 | -0.294 |
| delta_Rv0954 | -1.314 | -0.093 |
| PonA1 | -2.641 | -0.361 |
| EccD1_KO | 0.72 | 1.375 |
| EspI_KO | 1.121 | 1.124 |
| PE35_KO | -0.064 | 0.493 |
| PPE68_KO | 0.819 | 0.541 |
| glycerol2 | 0.038 | -0.105 |
| lignocerate | 0.911 | -0.012 |
| oleate | 0.112 | 0.238 |
| phosphatidylcholine | 0.562 | 0.099 |
| acetate | 1.16 | 0.151 |
| glucAc | 0.931 | 0.144 |
| Rv0950ko | 0.525 | 0.85 |
| Rv1096ko | 0.323 | 0.787 |
| Rv3684ko | -0.187 | 0.717 |
| delta_otsA_trehalose | 2.804 | 1.7 |