Top 10 genes with highest correlation to Rv0590/mce2B:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1153c/omt | (cc=0.5438) | info on Rv1153c/omt |
| Rv2689c/- | (cc=0.453) | info on Rv2689c/- |
| Rv0442c/PPE10 | (cc=0.4458) | info on Rv0442c/PPE10 |
| Rv1001/arcA | (cc=0.4333) | info on Rv1001/arcA |
| Rv0030/- | (cc=0.4276) | info on Rv0030/- |
| Rv0958/- | (cc=0.4067) | info on Rv0958/- |
| Rv2756c/hsdM | (cc=0.3986) | info on Rv2756c/hsdM |
| Rv0591/mce2C | (cc=0.3969) | info on Rv0591/mce2C |
| Rv0698/- | (cc=0.3943) | info on Rv0698/- |
| Rv2407/- | (cc=0.3892) | info on Rv2407/- |
Correlation of Rv0590/mce2B with Rv0698/-
Normalized LFCs for Rv0590/mce2B:
(description and provenance of datasets)
| Rv0590/mce2B | Rv0698/- | |
| Fe_supp_jason_reseq | -2.234 | -2.327 |
| low_pH_jason_reseq | 0.918 | 0.706 |
| NO_jason_reseq | 0.614 | -0.155 |
| B6_jason_reseq | -2.589 | -2.577 |
| MHCII_jason_reseq | -1.251 | -1.035 |
| Isoniazid02 | 0.713 | -0.113 |
| Rifampicin4 | -0.791 | 0.39 |
| Ethambutol3 | -0.422 | 0.336 |
| Meropenem3 | -0.399 | 0.089 |
| Vancomycin16 | -0.6 | 0.0 |
| Rv2680_day32 | -0.828 | 1.157 |
| H37Rv_KO_MarP | -0.175 | 0.313 |
| hypoxia_3wks | -0.586 | -0.921 |
| hypoxia_6wks | -0.361 | -1.059 |
| glycerol | -0.193 | 0.192 |
| cholesterol | 0.073 | 0.203 |
| AJ | 0.203 | -0.118 |
| Bibs02 | 1.084 | -0.775 |
| Bibs02c | -0.859 | -1.622 |
| BL6 | -0.614 | 1.536 |
| BL6a | -0.399 | -0.207 |
| BXD01 | 0.05 | 0.911 |
| BXD010 | 0.128 | 0.432 |
| BXD011 | -0.236 | 0.233 |
| BXD03 | -0.054 | -0.069 |
| BXD04 | 0.047 | 2.14 |
| BXD05 | 0.984 | 0.835 |
| BXD06 | -0.473 | 0.451 |
| BXD07 | -0.152 | 1.134 |
| BXD08 | -0.447 | 0.541 |
| BXD09 | -0.095 | -0.071 |
| CAST | 0.23 | -0.37 |
| CCcont | -0.04 | 2.126 |
| DS01 | -0.294 | 0.527 |
| DS02 | 0.164 | 0.654 |
| DS04 | 0.682 | 0.354 |
| DS0c | 0.217 | 0.809 |
| GP01 | -0.425 | 0.715 |
| GP02 | 0.052 | -0.292 |
| GP0c | 0.68 | 1.916 |
| NOD | 0.853 | 1.57 |
| NZO | -0.402 | -0.321 |
| PWK | 0.148 | 0.274 |
| H37Rv_KO_CtpC | 0.379 | -0.261 |
| H37Rv_KO_CtpD | 0.796 | 0.949 |
| H37Rv_KO_Rv1272 | 0.106 | 0.315 |
| H37Rv_KO_SugABC | 1.642 | -0.669 |
| H37Rv_KO_MbtN | -1.093 | 0.098 |
| Trans05 | -1.339 | 1.877 |
| macrophage_unactivated | 0.133 | 0.133 |
| IL1 | -0.756 | -0.128 |
| Rapamycin | 0.252 | -0.132 |
| Tcell | 0.137 | 0.521 |
| GMCSF | -0.478 | -1.172 |
| IFNab | 0.308 | 0.248 |
| IFNg | 0.166 | -0.355 |
| IFNg_GMCSF1 | 0.848 | -0.135 |
| Rv1432_day32 | 1.043 | 0.0 |
| Rv1565c_day32 | -0.607 | 0.45 |
| secA2_input | -0.398 | -2.719 |
| delta_Rv3594 | -0.791 | -0.922 |
| delta_Rv3717 | -0.715 | -2.231 |
| delta_Rv3811 | 0.378 | -0.107 |
| delta_Rv0954 | -1.314 | -0.142 |
| PonA1 | -2.641 | -1.196 |
| EccD1_KO | 0.72 | -2.144 |
| EspI_KO | 1.121 | -0.827 |
| PE35_KO | -0.064 | -0.128 |
| PPE68_KO | 0.819 | -0.141 |
| glycerol2 | 0.038 | 2.221 |
| lignocerate | 0.911 | 2.498 |
| oleate | 0.112 | -0.688 |
| phosphatidylcholine | 0.562 | 2.359 |
| acetate | 1.16 | 3.41 |
| glucAc | 0.931 | 2.902 |
| Rv0950ko | 0.525 | -0.256 |
| Rv1096ko | 0.323 | -0.528 |
| Rv3684ko | -0.187 | -0.888 |
| delta_otsA_trehalose | 2.804 | 1.38 |