Top 10 genes with highest correlation to Rv0583c/lpqN:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2484c/- | (cc=0.5411) | info on Rv2484c/- |
| Rv3060c/- | (cc=0.5353) | info on Rv3060c/- |
| Rv0959/- | (cc=0.5193) | info on Rv0959/- |
| Rv1070c/echA8 | (cc=0.5113) | info on Rv1070c/echA8 |
| Rv0569/- | (cc=0.5084) | info on Rv0569/- |
| Rv1674c/- | (cc=0.4975) | info on Rv1674c/- |
| Rv1071c/echA9 | (cc=0.4962) | info on Rv1071c/echA9 |
| Rv0840c/pip | (cc=0.4873) | info on Rv0840c/pip |
| Rv0139/- | (cc=0.4798) | info on Rv0139/- |
| Rv0613c/- | (cc=0.4796) | info on Rv0613c/- |
Correlation of Rv0583c/lpqN with Rv3060c/-
Normalized LFCs for Rv0583c/lpqN:
(description and provenance of datasets)
| Rv0583c/lpqN | Rv3060c/- | |
| Fe_supp_jason_reseq | 0.112 | -0.284 |
| low_pH_jason_reseq | -1.896 | -0.56 |
| NO_jason_reseq | 0.063 | -0.21 |
| B6_jason_reseq | 0.578 | -0.168 |
| MHCII_jason_reseq | 0.08 | 0.013 |
| Isoniazid02 | -0.311 | -0.314 |
| Rifampicin4 | 0.022 | -0.393 |
| Ethambutol3 | 2.689 | 2.165 |
| Meropenem3 | -0.029 | 0.212 |
| Vancomycin16 | 0.164 | -0.17 |
| Rv2680_day32 | 1.456 | -0.044 |
| H37Rv_KO_MarP | 0.213 | 0.813 |
| hypoxia_3wks | 0.159 | -0.431 |
| hypoxia_6wks | -0.173 | -0.643 |
| glycerol | -0.211 | -1.012 |
| cholesterol | 0.186 | -0.686 |
| AJ | -0.387 | -0.04 |
| Bibs02 | 0.575 | -0.632 |
| Bibs02c | 0.176 | 0.036 |
| BL6 | -0.397 | -1.318 |
| BL6a | 0.393 | -0.75 |
| BXD01 | 0.526 | -0.981 |
| BXD010 | -0.522 | -1.011 |
| BXD011 | 0.339 | -0.872 |
| BXD03 | -0.04 | -0.581 |
| BXD04 | -0.211 | -1.323 |
| BXD05 | -0.032 | -0.371 |
| BXD06 | 0.0 | -0.814 |
| BXD07 | 0.02 | -0.964 |
| BXD08 | 0.452 | -0.63 |
| BXD09 | -0.234 | -1.128 |
| CAST | -0.082 | -0.327 |
| CCcont | -0.328 | -0.957 |
| DS01 | 0.303 | -0.53 |
| DS02 | 0.123 | -0.972 |
| DS04 | 0.385 | -0.655 |
| DS0c | -0.212 | -0.647 |
| GP01 | -0.178 | -1.267 |
| GP02 | 0.234 | 0.01 |
| GP0c | -0.253 | -1.594 |
| NOD | 0.039 | -0.688 |
| NZO | -0.34 | 0.208 |
| PWK | -0.064 | -0.331 |
| H37Rv_KO_CtpC | -0.926 | -0.106 |
| H37Rv_KO_CtpD | -0.624 | 0.222 |
| H37Rv_KO_Rv1272 | -1.591 | -1.167 |
| H37Rv_KO_SugABC | -0.96 | -0.678 |
| H37Rv_KO_MbtN | -0.78 | -0.978 |
| Trans05 | -0.847 | -0.441 |
| macrophage_unactivated | -0.395 | -0.893 |
| IL1 | -1.068 | -1.112 |
| Rapamycin | -0.417 | -0.393 |
| Tcell | 0.238 | -0.505 |
| GMCSF | -0.536 | 0.063 |
| IFNab | -0.937 | -0.508 |
| IFNg | -0.013 | -0.27 |
| IFNg_GMCSF1 | -0.258 | -0.487 |
| Rv1432_day32 | 0.0 | 0.098 |
| Rv1565c_day32 | 0.659 | -0.586 |
| secA2_input | 0.055 | -0.554 |
| delta_Rv3594 | 0.662 | 0.064 |
| delta_Rv3717 | 0.451 | 0.22 |
| delta_Rv3811 | -0.381 | -0.32 |
| delta_Rv0954 | 0.156 | 0.176 |
| PonA1 | 0.321 | 0.484 |
| EccD1_KO | 0.477 | 0.414 |
| EspI_KO | 1.774 | 0.388 |
| PE35_KO | 1.263 | 0.461 |
| PPE68_KO | 0.755 | -0.397 |
| glycerol2 | 0.28 | 0.353 |
| lignocerate | -0.23 | -0.371 |
| oleate | 0.75 | -0.398 |
| phosphatidylcholine | 0.437 | 0.183 |
| acetate | -0.464 | -0.785 |
| glucAc | -0.556 | -0.589 |
| Rv0950ko | 0.603 | 0.0 |
| Rv1096ko | 1.098 | -0.371 |
| Rv3684ko | -0.311 | -0.675 |
| delta_otsA_trehalose | 0.598 | 0.494 |