Top 10 genes with highest correlation to Rv0583c/lpqN:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2484c/- | (cc=0.5411) | info on Rv2484c/- |
| Rv3060c/- | (cc=0.5353) | info on Rv3060c/- |
| Rv0959/- | (cc=0.5193) | info on Rv0959/- |
| Rv1070c/echA8 | (cc=0.5113) | info on Rv1070c/echA8 |
| Rv0569/- | (cc=0.5084) | info on Rv0569/- |
| Rv1674c/- | (cc=0.4975) | info on Rv1674c/- |
| Rv1071c/echA9 | (cc=0.4962) | info on Rv1071c/echA9 |
| Rv0840c/pip | (cc=0.4873) | info on Rv0840c/pip |
| Rv0139/- | (cc=0.4798) | info on Rv0139/- |
| Rv0613c/- | (cc=0.4796) | info on Rv0613c/- |
Correlation of Rv0583c/lpqN with Rv1070c/echA8
Normalized LFCs for Rv0583c/lpqN:
(description and provenance of datasets)
| Rv0583c/lpqN | Rv1070c/echA8 | |
| Fe_supp_jason_reseq | 0.112 | 0.044 |
| low_pH_jason_reseq | -1.896 | -1.447 |
| NO_jason_reseq | 0.063 | -2.363 |
| B6_jason_reseq | 0.578 | -0.763 |
| MHCII_jason_reseq | 0.08 | -0.657 |
| Isoniazid02 | -0.311 | 0.955 |
| Rifampicin4 | 0.022 | 1.156 |
| Ethambutol3 | 2.689 | 5.307 |
| Meropenem3 | -0.029 | 0.067 |
| Vancomycin16 | 0.164 | 1.772 |
| Rv2680_day32 | 1.456 | -1.231 |
| H37Rv_KO_MarP | 0.213 | -0.203 |
| hypoxia_3wks | 0.159 | -3.856 |
| hypoxia_6wks | -0.173 | -3.061 |
| glycerol | -0.211 | -0.493 |
| cholesterol | 0.186 | 0.361 |
| AJ | -0.387 | -0.598 |
| Bibs02 | 0.575 | 0.107 |
| Bibs02c | 0.176 | -0.982 |
| BL6 | -0.397 | -1.623 |
| BL6a | 0.393 | -2.381 |
| BXD01 | 0.526 | -3.234 |
| BXD010 | -0.522 | -2.02 |
| BXD011 | 0.339 | -3.162 |
| BXD03 | -0.04 | -2.674 |
| BXD04 | -0.211 | -1.65 |
| BXD05 | -0.032 | -2.155 |
| BXD06 | 0.0 | -2.347 |
| BXD07 | 0.02 | -2.454 |
| BXD08 | 0.452 | -1.678 |
| BXD09 | -0.234 | -2.661 |
| CAST | -0.082 | -1.416 |
| CCcont | -0.328 | -1.565 |
| DS01 | 0.303 | -0.241 |
| DS02 | 0.123 | 0.425 |
| DS04 | 0.385 | 0.18 |
| DS0c | -0.212 | -0.438 |
| GP01 | -0.178 | -2.249 |
| GP02 | 0.234 | -2.219 |
| GP0c | -0.253 | -1.975 |
| NOD | 0.039 | -1.811 |
| NZO | -0.34 | -1.913 |
| PWK | -0.064 | -0.986 |
| H37Rv_KO_CtpC | -0.926 | -1.22 |
| H37Rv_KO_CtpD | -0.624 | -2.977 |
| H37Rv_KO_Rv1272 | -1.591 | -2.365 |
| H37Rv_KO_SugABC | -0.96 | -1.687 |
| H37Rv_KO_MbtN | -0.78 | -2.192 |
| Trans05 | -0.847 | -1.637 |
| macrophage_unactivated | -0.395 | -2.898 |
| IL1 | -1.068 | -4.034 |
| Rapamycin | -0.417 | -1.706 |
| Tcell | 0.238 | -3.483 |
| GMCSF | -0.536 | -1.991 |
| IFNab | -0.937 | -2.279 |
| IFNg | -0.013 | -4.191 |
| IFNg_GMCSF1 | -0.258 | -3.249 |
| Rv1432_day32 | 0.0 | -0.404 |
| Rv1565c_day32 | 0.659 | -1.316 |
| secA2_input | 0.055 | -0.712 |
| delta_Rv3594 | 0.662 | 0.315 |
| delta_Rv3717 | 0.451 | -0.795 |
| delta_Rv3811 | -0.381 | -0.913 |
| delta_Rv0954 | 0.156 | -0.19 |
| PonA1 | 0.321 | 0.446 |
| EccD1_KO | 0.477 | 1.25 |
| EspI_KO | 1.774 | 1.192 |
| PE35_KO | 1.263 | 0.858 |
| PPE68_KO | 0.755 | 1.069 |
| glycerol2 | 0.28 | 0.761 |
| lignocerate | -0.23 | 0.994 |
| oleate | 0.75 | 0.737 |
| phosphatidylcholine | 0.437 | 0.57 |
| acetate | -0.464 | 0.603 |
| glucAc | -0.556 | 1.012 |
| Rv0950ko | 0.603 | 0.543 |
| Rv1096ko | 1.098 | 1.113 |
| Rv3684ko | -0.311 | 0.177 |
| delta_otsA_trehalose | 0.598 | -0.229 |