Top 10 genes with highest correlation to Rv0583c/lpqN:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2484c/- | (cc=0.5411) | info on Rv2484c/- |
| Rv3060c/- | (cc=0.5353) | info on Rv3060c/- |
| Rv0959/- | (cc=0.5193) | info on Rv0959/- |
| Rv1070c/echA8 | (cc=0.5113) | info on Rv1070c/echA8 |
| Rv0569/- | (cc=0.5084) | info on Rv0569/- |
| Rv1674c/- | (cc=0.4975) | info on Rv1674c/- |
| Rv1071c/echA9 | (cc=0.4962) | info on Rv1071c/echA9 |
| Rv0840c/pip | (cc=0.4873) | info on Rv0840c/pip |
| Rv0139/- | (cc=0.4798) | info on Rv0139/- |
| Rv0613c/- | (cc=0.4796) | info on Rv0613c/- |
Correlation of Rv0583c/lpqN with Rv0569/-
Normalized LFCs for Rv0583c/lpqN:
(description and provenance of datasets)
| Rv0583c/lpqN | Rv0569/- | |
| Fe_supp_jason_reseq | 0.112 | -1.485 |
| low_pH_jason_reseq | -1.896 | -0.716 |
| NO_jason_reseq | 0.063 | -0.252 |
| B6_jason_reseq | 0.578 | 1.587 |
| MHCII_jason_reseq | 0.08 | 1.691 |
| Isoniazid02 | -0.311 | -0.192 |
| Rifampicin4 | 0.022 | 0.154 |
| Ethambutol3 | 2.689 | 1.679 |
| Meropenem3 | -0.029 | -0.053 |
| Vancomycin16 | 0.164 | 0.528 |
| Rv2680_day32 | 1.456 | -0.348 |
| H37Rv_KO_MarP | 0.213 | -0.461 |
| hypoxia_3wks | 0.159 | -0.08 |
| hypoxia_6wks | -0.173 | -0.75 |
| glycerol | -0.211 | -0.43 |
| cholesterol | 0.186 | -0.452 |
| AJ | -0.387 | -0.294 |
| Bibs02 | 0.575 | 0.691 |
| Bibs02c | 0.176 | -1.079 |
| BL6 | -0.397 | -0.127 |
| BL6a | 0.393 | -1.181 |
| BXD01 | 0.526 | -0.636 |
| BXD010 | -0.522 | -1.186 |
| BXD011 | 0.339 | -1.267 |
| BXD03 | -0.04 | -1.296 |
| BXD04 | -0.211 | 0.528 |
| BXD05 | -0.032 | -1.498 |
| BXD06 | 0.0 | -1.592 |
| BXD07 | 0.02 | -1.04 |
| BXD08 | 0.452 | -1.694 |
| BXD09 | -0.234 | -1.476 |
| CAST | -0.082 | -0.506 |
| CCcont | -0.328 | -1.548 |
| DS01 | 0.303 | 0.373 |
| DS02 | 0.123 | 0.165 |
| DS04 | 0.385 | -0.202 |
| DS0c | -0.212 | 0.178 |
| GP01 | -0.178 | 0.776 |
| GP02 | 0.234 | 1.362 |
| GP0c | -0.253 | -0.815 |
| NOD | 0.039 | 0.171 |
| NZO | -0.34 | -0.686 |
| PWK | -0.064 | -0.361 |
| H37Rv_KO_CtpC | -0.926 | -1.599 |
| H37Rv_KO_CtpD | -0.624 | -1.699 |
| H37Rv_KO_Rv1272 | -1.591 | -1.84 |
| H37Rv_KO_SugABC | -0.96 | -2.259 |
| H37Rv_KO_MbtN | -0.78 | -2.547 |
| Trans05 | -0.847 | -1.505 |
| macrophage_unactivated | -0.395 | -0.148 |
| IL1 | -1.068 | -0.178 |
| Rapamycin | -0.417 | -1.356 |
| Tcell | 0.238 | -0.544 |
| GMCSF | -0.536 | -0.618 |
| IFNab | -0.937 | -0.142 |
| IFNg | -0.013 | -0.216 |
| IFNg_GMCSF1 | -0.258 | -1.373 |
| Rv1432_day32 | 0.0 | -0.508 |
| Rv1565c_day32 | 0.659 | 0.199 |
| secA2_input | 0.055 | 0.805 |
| delta_Rv3594 | 0.662 | -0.184 |
| delta_Rv3717 | 0.451 | 0.297 |
| delta_Rv3811 | -0.381 | 0.593 |
| delta_Rv0954 | 0.156 | -0.518 |
| PonA1 | 0.321 | 0.128 |
| EccD1_KO | 0.477 | 0.428 |
| EspI_KO | 1.774 | 0.459 |
| PE35_KO | 1.263 | -0.099 |
| PPE68_KO | 0.755 | -0.205 |
| glycerol2 | 0.28 | 1.08 |
| lignocerate | -0.23 | -0.408 |
| oleate | 0.75 | 1.253 |
| phosphatidylcholine | 0.437 | 0.255 |
| acetate | -0.464 | -0.49 |
| glucAc | -0.556 | -1.225 |
| Rv0950ko | 0.603 | 0.0 |
| Rv1096ko | 1.098 | 0.452 |
| Rv3684ko | -0.311 | 0.131 |
| delta_otsA_trehalose | 0.598 | 1.266 |