Top 10 genes with highest correlation to Rv0567/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0327c/cyp135A1 | (cc=0.5657) | info on Rv0327c/cyp135A1 |
| Rv0794c/- | (cc=0.5311) | info on Rv0794c/- |
| Rv3777/- | (cc=0.4983) | info on Rv3777/- |
| Rv2998/- | (cc=0.4873) | info on Rv2998/- |
| Rv0024/- | (cc=0.481) | info on Rv0024/- |
| Rv2424c/- | (cc=0.4761) | info on Rv2424c/- |
| Rv3325/- | (cc=0.4685) | info on Rv3325/- |
| Rv1200/- | (cc=0.4522) | info on Rv1200/- |
| Rv2644c/- | (cc=0.4498) | info on Rv2644c/- |
| Rv2915c/- | (cc=0.4485) | info on Rv2915c/- |
Correlation of Rv0567/- with Rv3777/-
Normalized LFCs for Rv0567/-:
(description and provenance of datasets)
| Rv0567/- | Rv3777/- | |
| Fe_supp_jason_reseq | 0.18 | 0.33 |
| low_pH_jason_reseq | -0.55 | -0.796 |
| NO_jason_reseq | -0.347 | 0.412 |
| B6_jason_reseq | 0.591 | 0.128 |
| MHCII_jason_reseq | 0.752 | 1.049 |
| Isoniazid02 | 0.033 | 0.565 |
| Rifampicin4 | 0.295 | 0.16 |
| Ethambutol3 | 0.338 | 2.214 |
| Meropenem3 | -0.272 | 0.603 |
| Vancomycin16 | -0.186 | 0.186 |
| Rv2680_day32 | -1.09 | -0.963 |
| H37Rv_KO_MarP | 0.19 | 0.69 |
| hypoxia_3wks | 0.662 | -0.929 |
| hypoxia_6wks | 0.825 | -0.455 |
| glycerol | -0.358 | -0.022 |
| cholesterol | -0.516 | -1.003 |
| AJ | 0.182 | 0.783 |
| Bibs02 | 0.629 | -0.856 |
| Bibs02c | 0.306 | -0.092 |
| BL6 | 0.187 | -0.975 |
| BL6a | 0.227 | -0.109 |
| BXD01 | -0.481 | -0.387 |
| BXD010 | 0.384 | 0.703 |
| BXD011 | 0.374 | -0.435 |
| BXD03 | 0.128 | -0.326 |
| BXD04 | 0.293 | -0.027 |
| BXD05 | -0.224 | -1.246 |
| BXD06 | 0.142 | -0.359 |
| BXD07 | 0.017 | -0.959 |
| BXD08 | -0.184 | -0.978 |
| BXD09 | -0.043 | -0.11 |
| CAST | 0.294 | 0.345 |
| CCcont | -0.187 | -0.188 |
| DS01 | -0.022 | 1.172 |
| DS02 | 0.115 | 0.285 |
| DS04 | -0.7 | -0.72 |
| DS0c | 0.68 | 1.002 |
| GP01 | 0.528 | -0.279 |
| GP02 | 0.379 | -0.212 |
| GP0c | -0.486 | -0.102 |
| NOD | 0.404 | 0.828 |
| NZO | 0.364 | 0.75 |
| PWK | 0.266 | 0.752 |
| H37Rv_KO_CtpC | -0.777 | -1.731 |
| H37Rv_KO_CtpD | -0.575 | -0.658 |
| H37Rv_KO_Rv1272 | -0.377 | -0.481 |
| H37Rv_KO_SugABC | -0.344 | -1.287 |
| H37Rv_KO_MbtN | -0.417 | -0.263 |
| Trans05 | -0.094 | -0.485 |
| macrophage_unactivated | 0.057 | -1.016 |
| IL1 | -0.558 | -1.614 |
| Rapamycin | -0.528 | -0.261 |
| Tcell | -0.059 | -1.975 |
| GMCSF | -0.246 | 0.053 |
| IFNab | -0.475 | -0.257 |
| IFNg | -0.11 | -1.376 |
| IFNg_GMCSF1 | -0.415 | -0.776 |
| Rv1432_day32 | 0.169 | -0.332 |
| Rv1565c_day32 | -0.368 | -0.594 |
| secA2_input | -0.094 | -0.615 |
| delta_Rv3594 | -1.037 | -0.961 |
| delta_Rv3717 | -0.708 | -0.505 |
| delta_Rv3811 | -0.294 | -0.681 |
| delta_Rv0954 | -0.227 | -0.313 |
| PonA1 | -0.464 | -0.744 |
| EccD1_KO | 1.039 | 0.812 |
| EspI_KO | 0.761 | 0.431 |
| PE35_KO | 0.741 | 0.44 |
| PPE68_KO | 0.854 | 0.154 |
| glycerol2 | 0.406 | 1.59 |
| lignocerate | 0.744 | 0.605 |
| oleate | -0.4 | 1.116 |
| phosphatidylcholine | 0.459 | 1.125 |
| acetate | 0.359 | -0.048 |
| glucAc | 0.423 | -0.605 |
| Rv0950ko | 0.597 | 0.841 |
| Rv1096ko | 0.338 | 1.408 |
| Rv3684ko | 0.088 | 0.783 |
| delta_otsA_trehalose | -0.88 | -0.601 |