Top 10 genes with highest correlation to Rv0567/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0327c/cyp135A1 | (cc=0.5657) | info on Rv0327c/cyp135A1 |
| Rv0794c/- | (cc=0.5311) | info on Rv0794c/- |
| Rv3777/- | (cc=0.4983) | info on Rv3777/- |
| Rv2998/- | (cc=0.4873) | info on Rv2998/- |
| Rv0024/- | (cc=0.481) | info on Rv0024/- |
| Rv2424c/- | (cc=0.4761) | info on Rv2424c/- |
| Rv3325/- | (cc=0.4685) | info on Rv3325/- |
| Rv1200/- | (cc=0.4522) | info on Rv1200/- |
| Rv2644c/- | (cc=0.4498) | info on Rv2644c/- |
| Rv2915c/- | (cc=0.4485) | info on Rv2915c/- |
Correlation of Rv0567/- with Rv0794c/-
Normalized LFCs for Rv0567/-:
(description and provenance of datasets)
| Rv0567/- | Rv0794c/- | |
| Fe_supp_jason_reseq | 0.18 | -0.082 |
| low_pH_jason_reseq | -0.55 | -1.35 |
| NO_jason_reseq | -0.347 | -0.184 |
| B6_jason_reseq | 0.591 | 1.001 |
| MHCII_jason_reseq | 0.752 | 1.09 |
| Isoniazid02 | 0.033 | -0.272 |
| Rifampicin4 | 0.295 | -0.384 |
| Ethambutol3 | 0.338 | -0.323 |
| Meropenem3 | -0.272 | -0.783 |
| Vancomycin16 | -0.186 | -0.146 |
| Rv2680_day32 | -1.09 | 0.581 |
| H37Rv_KO_MarP | 0.19 | 0.025 |
| hypoxia_3wks | 0.662 | 0.881 |
| hypoxia_6wks | 0.825 | 0.942 |
| glycerol | -0.358 | -0.183 |
| cholesterol | -0.516 | -0.194 |
| AJ | 0.182 | 0.124 |
| Bibs02 | 0.629 | -0.683 |
| Bibs02c | 0.306 | -0.243 |
| BL6 | 0.187 | -0.482 |
| BL6a | 0.227 | -0.375 |
| BXD01 | -0.481 | -0.429 |
| BXD010 | 0.384 | 0.087 |
| BXD011 | 0.374 | -0.42 |
| BXD03 | 0.128 | 0.198 |
| BXD04 | 0.293 | 0.147 |
| BXD05 | -0.224 | -0.043 |
| BXD06 | 0.142 | 0.102 |
| BXD07 | 0.017 | -0.486 |
| BXD08 | -0.184 | 0.091 |
| BXD09 | -0.043 | -0.347 |
| CAST | 0.294 | 0.225 |
| CCcont | -0.187 | -0.147 |
| DS01 | -0.022 | -0.513 |
| DS02 | 0.115 | 1.027 |
| DS04 | -0.7 | 0.015 |
| DS0c | 0.68 | 0.148 |
| GP01 | 0.528 | -0.605 |
| GP02 | 0.379 | 0.769 |
| GP0c | -0.486 | 0.021 |
| NOD | 0.404 | 0.052 |
| NZO | 0.364 | 0.584 |
| PWK | 0.266 | 0.34 |
| H37Rv_KO_CtpC | -0.777 | -0.644 |
| H37Rv_KO_CtpD | -0.575 | -1.377 |
| H37Rv_KO_Rv1272 | -0.377 | 0.353 |
| H37Rv_KO_SugABC | -0.344 | -0.048 |
| H37Rv_KO_MbtN | -0.417 | -0.951 |
| Trans05 | -0.094 | 0.543 |
| macrophage_unactivated | 0.057 | -0.47 |
| IL1 | -0.558 | -1.032 |
| Rapamycin | -0.528 | -0.414 |
| Tcell | -0.059 | 1.049 |
| GMCSF | -0.246 | -1.006 |
| IFNab | -0.475 | -1.578 |
| IFNg | -0.11 | -0.93 |
| IFNg_GMCSF1 | -0.415 | -0.993 |
| Rv1432_day32 | 0.169 | 0.233 |
| Rv1565c_day32 | -0.368 | 1.005 |
| secA2_input | -0.094 | 0.373 |
| delta_Rv3594 | -1.037 | -0.54 |
| delta_Rv3717 | -0.708 | -0.337 |
| delta_Rv3811 | -0.294 | -0.424 |
| delta_Rv0954 | -0.227 | -0.548 |
| PonA1 | -0.464 | -0.2 |
| EccD1_KO | 1.039 | 0.724 |
| EspI_KO | 0.761 | 1.041 |
| PE35_KO | 0.741 | 1.283 |
| PPE68_KO | 0.854 | 0.755 |
| glycerol2 | 0.406 | 1.288 |
| lignocerate | 0.744 | 1.604 |
| oleate | -0.4 | 0.0 |
| phosphatidylcholine | 0.459 | 1.345 |
| acetate | 0.359 | 1.596 |
| glucAc | 0.423 | 1.213 |
| Rv0950ko | 0.597 | -1.122 |
| Rv1096ko | 0.338 | 0.727 |
| Rv3684ko | 0.088 | -0.452 |
| delta_otsA_trehalose | -0.88 | -0.88 |