TnSeqCorr

Top 10 genes with highest correlation to Rv0567/-:

update plotcorrelationlink to info on gene
Rv0327c/cyp135A1 (cc=0.5657) info on Rv0327c/cyp135A1
Rv0794c/- (cc=0.5311) info on Rv0794c/-
Rv3777/- (cc=0.4983) info on Rv3777/-
Rv2998/- (cc=0.4873) info on Rv2998/-
Rv0024/- (cc=0.481) info on Rv0024/-
Rv2424c/- (cc=0.4761) info on Rv2424c/-
Rv3325/- (cc=0.4685) info on Rv3325/-
Rv1200/- (cc=0.4522) info on Rv1200/-
Rv2644c/- (cc=0.4498) info on Rv2644c/-
Rv2915c/- (cc=0.4485) info on Rv2915c/-

Correlation of Rv0567/- with Rv0327c/cyp135A1

Normalized LFCs for Rv0567/-:
(description and provenance of datasets)
Rv0567/-Rv0327c/cyp135A1
Fe_supp_jason_reseq

0.18

0.12

low_pH_jason_reseq

-0.55

0.095

NO_jason_reseq

-0.347

-0.433

B6_jason_reseq

0.591

1.032

MHCII_jason_reseq

0.752

2.121

Isoniazid02

0.033

-0.463

Rifampicin4

0.295

-0.615

Ethambutol3

0.338

-0.173

Meropenem3

-0.272

-0.252

Vancomycin16

-0.186

-0.122

Rv2680_day32

-1.09

-0.688

H37Rv_KO_MarP

0.19

-0.086

hypoxia_3wks

0.662

-0.55

hypoxia_6wks

0.825

-0.403

glycerol

-0.358

-0.455

cholesterol

-0.516

-0.52

AJ

0.182

0.605

Bibs02

0.629

-0.242

Bibs02c

0.306

1.023

BL6

0.187

0.414

BL6a

0.227

0.393

BXD01

-0.481

-0.636

BXD010

0.384

0.151

BXD011

0.374

-0.136

BXD03

0.128

-0.372

BXD04

0.293

-0.573

BXD05

-0.224

-0.44

BXD06

0.142

-0.367

BXD07

0.017

-0.482

BXD08

-0.184

-0.021

BXD09

-0.043

-0.401

CAST

0.294

0.335

CCcont

-0.187

-0.308

DS01

-0.022

0.108

DS02

0.115

-0.104

DS04

-0.7

-0.514

DS0c

0.68

0.669

GP01

0.528

0.202

GP02

0.379

0.999

GP0c

-0.486

-0.219

NOD

0.404

-0.22

NZO

0.364

-0.064

PWK

0.266

0.271

H37Rv_KO_CtpC

-0.777

-1.103

H37Rv_KO_CtpD

-0.575

-0.273

H37Rv_KO_Rv1272

-0.377

-0.778

H37Rv_KO_SugABC

-0.344

-1.177

H37Rv_KO_MbtN

-0.417

-0.902

Trans05

-0.094

-0.346

macrophage_unactivated

0.057

0.65

IL1

-0.558

-0.341

Rapamycin

-0.528

-0.448

Tcell

-0.059

0.222

GMCSF

-0.246

0.481

IFNab

-0.475

0.245

IFNg

-0.11

0.11

IFNg_GMCSF1

-0.415

0.76

Rv1432_day32

0.169

0.0

Rv1565c_day32

-0.368

0.398

secA2_input

-0.094

-0.033

delta_Rv3594

-1.037

-0.791

delta_Rv3717

-0.708

-0.268

delta_Rv3811

-0.294

-0.457

delta_Rv0954

-0.227

-0.16

PonA1

-0.464

0.557

EccD1_KO

1.039

0.457

EspI_KO

0.761

-0.094

PE35_KO

0.741

0.362

PPE68_KO

0.854

0.538

glycerol2

0.406

0.298

lignocerate

0.744

1.14

oleate

-0.4

-0.578

phosphatidylcholine

0.459

0.604

acetate

0.359

1.119

glucAc

0.423

0.696

Rv0950ko

0.597

1.173

Rv1096ko

0.338

0.627

Rv3684ko

0.088

0.96

delta_otsA_trehalose

-0.88

-1.732