Top 10 genes with highest correlation to Rv0564c/gpdA1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2405/- | (cc=0.6131) | info on Rv2405/- |
| Rv2638/- | (cc=0.6092) | info on Rv2638/- |
| Rv0789c/- | (cc=0.5604) | info on Rv0789c/- |
| Rv3055/- | (cc=0.5557) | info on Rv3055/- |
| Rv2802c/- | (cc=0.5549) | info on Rv2802c/- |
| Rv2613c/- | (cc=0.5541) | info on Rv2613c/- |
| Rv3506/fadD17 | (cc=0.5484) | info on Rv3506/fadD17 |
| Rv1038c/esxJ | (cc=0.5475) | info on Rv1038c/esxJ |
| Rv0757/phoP | (cc=0.5396) | info on Rv0757/phoP |
| Rv0089/- | (cc=0.5387) | info on Rv0089/- |
Correlation of Rv0564c/gpdA1 with Rv3055/-
Normalized LFCs for Rv0564c/gpdA1:
(description and provenance of datasets)
| Rv0564c/gpdA1 | Rv3055/- | |
| Fe_supp_jason_reseq | 0.354 | -0.038 |
| low_pH_jason_reseq | -0.32 | -1.819 |
| NO_jason_reseq | 0.047 | -1.748 |
| B6_jason_reseq | 0.298 | -0.069 |
| MHCII_jason_reseq | 0.278 | -0.203 |
| Isoniazid02 | -0.22 | 0.0 |
| Rifampicin4 | -0.387 | 0.306 |
| Ethambutol3 | -0.04 | 0.95 |
| Meropenem3 | 0.127 | 1.065 |
| Vancomycin16 | 0.05 | 0.554 |
| Rv2680_day32 | 0.43 | 0.761 |
| H37Rv_KO_MarP | 0.44 | 0.354 |
| hypoxia_3wks | -0.905 | -0.347 |
| hypoxia_6wks | -0.171 | -1.042 |
| glycerol | -0.767 | -0.515 |
| cholesterol | 0.094 | -1.488 |
| AJ | -0.334 | 0.042 |
| Bibs02 | -1.221 | -0.523 |
| Bibs02c | -0.28 | -0.703 |
| BL6 | 0.236 | -0.993 |
| BL6a | -0.94 | -0.894 |
| BXD01 | 0.17 | -0.426 |
| BXD010 | -0.625 | -1.402 |
| BXD011 | -0.906 | -0.563 |
| BXD03 | -1.871 | -0.923 |
| BXD04 | 0.3 | 0.632 |
| BXD05 | -1.353 | -0.967 |
| BXD06 | -0.431 | -1.168 |
| BXD07 | -0.8 | -0.913 |
| BXD08 | -0.212 | -1.242 |
| BXD09 | -0.77 | -1.333 |
| CAST | -0.309 | 0.123 |
| CCcont | -0.269 | -0.225 |
| DS01 | -0.749 | -0.958 |
| DS02 | -0.131 | -1.966 |
| DS04 | 0.052 | 0.298 |
| DS0c | 0.028 | 0.013 |
| GP01 | 0.375 | 0.765 |
| GP02 | -0.038 | 2.108 |
| GP0c | 0.431 | 1.447 |
| NOD | -0.478 | -0.718 |
| NZO | -0.436 | -0.571 |
| PWK | -0.324 | -0.692 |
| H37Rv_KO_CtpC | -0.457 | -1.75 |
| H37Rv_KO_CtpD | -0.163 | -0.895 |
| H37Rv_KO_Rv1272 | -1.147 | -1.317 |
| H37Rv_KO_SugABC | -0.581 | -0.799 |
| H37Rv_KO_MbtN | -1.595 | -0.993 |
| Trans05 | -0.208 | -1.181 |
| macrophage_unactivated | 0.234 | 0.593 |
| IL1 | -0.039 | -0.528 |
| Rapamycin | 0.0 | 0.052 |
| Tcell | 0.544 | -0.58 |
| GMCSF | -1.117 | 0.613 |
| IFNab | -1.179 | -1.088 |
| IFNg | -1.131 | -2.248 |
| IFNg_GMCSF1 | -0.732 | 0.817 |
| Rv1432_day32 | -0.527 | -1.304 |
| Rv1565c_day32 | -0.466 | 0.147 |
| secA2_input | -0.058 | 1.935 |
| delta_Rv3594 | -0.483 | -1.837 |
| delta_Rv3717 | -0.607 | -1.419 |
| delta_Rv3811 | -0.329 | -1.404 |
| delta_Rv0954 | -0.447 | -1.24 |
| PonA1 | 0.0 | -0.39 |
| EccD1_KO | 0.806 | 2.911 |
| EspI_KO | 0.322 | 1.517 |
| PE35_KO | 1.117 | 2.214 |
| PPE68_KO | 0.314 | 3.443 |
| glycerol2 | 0.989 | 1.407 |
| lignocerate | 1.299 | 0.838 |
| oleate | 0.064 | 0.502 |
| phosphatidylcholine | 1.015 | 1.241 |
| acetate | 1.127 | 0.083 |
| glucAc | 1.072 | 0.164 |
| Rv0950ko | 0.546 | -0.727 |
| Rv1096ko | 1.264 | 1.716 |
| Rv3684ko | -0.226 | 0.252 |
| delta_otsA_trehalose | 0.285 | -0.491 |