Top 10 genes with highest correlation to Rv0564c/gpdA1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2405/- | (cc=0.6131) | info on Rv2405/- |
| Rv2638/- | (cc=0.6092) | info on Rv2638/- |
| Rv0789c/- | (cc=0.5604) | info on Rv0789c/- |
| Rv3055/- | (cc=0.5557) | info on Rv3055/- |
| Rv2802c/- | (cc=0.5549) | info on Rv2802c/- |
| Rv2613c/- | (cc=0.5541) | info on Rv2613c/- |
| Rv3506/fadD17 | (cc=0.5484) | info on Rv3506/fadD17 |
| Rv1038c/esxJ | (cc=0.5475) | info on Rv1038c/esxJ |
| Rv0757/phoP | (cc=0.5396) | info on Rv0757/phoP |
| Rv0089/- | (cc=0.5387) | info on Rv0089/- |
Correlation of Rv0564c/gpdA1 with Rv0789c/-
Normalized LFCs for Rv0564c/gpdA1:
(description and provenance of datasets)
| Rv0564c/gpdA1 | Rv0789c/- | |
| Fe_supp_jason_reseq | 0.354 | -0.073 |
| low_pH_jason_reseq | -0.32 | 0.284 |
| NO_jason_reseq | 0.047 | -1.362 |
| B6_jason_reseq | 0.298 | -0.395 |
| MHCII_jason_reseq | 0.278 | 0.449 |
| Isoniazid02 | -0.22 | -0.073 |
| Rifampicin4 | -0.387 | -0.815 |
| Ethambutol3 | -0.04 | -0.519 |
| Meropenem3 | 0.127 | -0.272 |
| Vancomycin16 | 0.05 | -0.167 |
| Rv2680_day32 | 0.43 | 0.222 |
| H37Rv_KO_MarP | 0.44 | -0.714 |
| hypoxia_3wks | -0.905 | -1.328 |
| hypoxia_6wks | -0.171 | 0.23 |
| glycerol | -0.767 | -0.873 |
| cholesterol | 0.094 | -0.682 |
| AJ | -0.334 | 0.02 |
| Bibs02 | -1.221 | -0.699 |
| Bibs02c | -0.28 | 0.018 |
| BL6 | 0.236 | -1.162 |
| BL6a | -0.94 | -0.405 |
| BXD01 | 0.17 | -0.307 |
| BXD010 | -0.625 | 0.104 |
| BXD011 | -0.906 | -1.379 |
| BXD03 | -1.871 | -0.768 |
| BXD04 | 0.3 | -0.667 |
| BXD05 | -1.353 | -0.707 |
| BXD06 | -0.431 | -1.847 |
| BXD07 | -0.8 | -1.23 |
| BXD08 | -0.212 | -0.68 |
| BXD09 | -0.77 | -0.47 |
| CAST | -0.309 | -0.332 |
| CCcont | -0.269 | -0.383 |
| DS01 | -0.749 | -0.021 |
| DS02 | -0.131 | -0.151 |
| DS04 | 0.052 | 1.314 |
| DS0c | 0.028 | 0.141 |
| GP01 | 0.375 | -0.133 |
| GP02 | -0.038 | -1.1 |
| GP0c | 0.431 | 0.0 |
| NOD | -0.478 | -0.303 |
| NZO | -0.436 | 1.224 |
| PWK | -0.324 | -0.246 |
| H37Rv_KO_CtpC | -0.457 | 0.412 |
| H37Rv_KO_CtpD | -0.163 | -1.97 |
| H37Rv_KO_Rv1272 | -1.147 | 0.069 |
| H37Rv_KO_SugABC | -0.581 | 0.403 |
| H37Rv_KO_MbtN | -1.595 | -1.769 |
| Trans05 | -0.208 | 1.333 |
| macrophage_unactivated | 0.234 | 0.776 |
| IL1 | -0.039 | 2.658 |
| Rapamycin | 0.0 | -0.433 |
| Tcell | 0.544 | 0.71 |
| GMCSF | -1.117 | -1.125 |
| IFNab | -1.179 | 0.744 |
| IFNg | -1.131 | -0.091 |
| IFNg_GMCSF1 | -0.732 | 1.279 |
| Rv1432_day32 | -0.527 | 1.095 |
| Rv1565c_day32 | -0.466 | 0.344 |
| secA2_input | -0.058 | -0.434 |
| delta_Rv3594 | -0.483 | -0.889 |
| delta_Rv3717 | -0.607 | 0.228 |
| delta_Rv3811 | -0.329 | -0.772 |
| delta_Rv0954 | -0.447 | -0.974 |
| PonA1 | 0.0 | -0.791 |
| EccD1_KO | 0.806 | 1.22 |
| EspI_KO | 0.322 | 0.499 |
| PE35_KO | 1.117 | 1.164 |
| PPE68_KO | 0.314 | 0.803 |
| glycerol2 | 0.989 | 3.129 |
| lignocerate | 1.299 | 3.78 |
| oleate | 0.064 | 0.196 |
| phosphatidylcholine | 1.015 | 2.994 |
| acetate | 1.127 | 3.712 |
| glucAc | 1.072 | 3.388 |
| Rv0950ko | 0.546 | 0.223 |
| Rv1096ko | 1.264 | 1.252 |
| Rv3684ko | -0.226 | 0.658 |
| delta_otsA_trehalose | 0.285 | -1.059 |