Top 10 genes with highest correlation to Rv0564c/gpdA1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2405/- | (cc=0.6131) | info on Rv2405/- |
| Rv2638/- | (cc=0.6092) | info on Rv2638/- |
| Rv0789c/- | (cc=0.5604) | info on Rv0789c/- |
| Rv3055/- | (cc=0.5557) | info on Rv3055/- |
| Rv2802c/- | (cc=0.5549) | info on Rv2802c/- |
| Rv2613c/- | (cc=0.5541) | info on Rv2613c/- |
| Rv3506/fadD17 | (cc=0.5484) | info on Rv3506/fadD17 |
| Rv1038c/esxJ | (cc=0.5475) | info on Rv1038c/esxJ |
| Rv0757/phoP | (cc=0.5396) | info on Rv0757/phoP |
| Rv0089/- | (cc=0.5387) | info on Rv0089/- |
Correlation of Rv0564c/gpdA1 with Rv2638/-
Normalized LFCs for Rv0564c/gpdA1:
(description and provenance of datasets)
| Rv0564c/gpdA1 | Rv2638/- | |
| Fe_supp_jason_reseq | 0.354 | -0.785 |
| low_pH_jason_reseq | -0.32 | 0.512 |
| NO_jason_reseq | 0.047 | 0.719 |
| B6_jason_reseq | 0.298 | 0.607 |
| MHCII_jason_reseq | 0.278 | 1.199 |
| Isoniazid02 | -0.22 | -0.137 |
| Rifampicin4 | -0.387 | 0.279 |
| Ethambutol3 | -0.04 | -0.146 |
| Meropenem3 | 0.127 | -0.06 |
| Vancomycin16 | 0.05 | 0.042 |
| Rv2680_day32 | 0.43 | 0.944 |
| H37Rv_KO_MarP | 0.44 | -0.045 |
| hypoxia_3wks | -0.905 | -0.55 |
| hypoxia_6wks | -0.171 | 1.28 |
| glycerol | -0.767 | -0.102 |
| cholesterol | 0.094 | 0.163 |
| AJ | -0.334 | 0.091 |
| Bibs02 | -1.221 | -0.056 |
| Bibs02c | -0.28 | 0.061 |
| BL6 | 0.236 | 0.021 |
| BL6a | -0.94 | -0.913 |
| BXD01 | 0.17 | -1.3 |
| BXD010 | -0.625 | -0.34 |
| BXD011 | -0.906 | -2.215 |
| BXD03 | -1.871 | -1.293 |
| BXD04 | 0.3 | 0.099 |
| BXD05 | -1.353 | -0.989 |
| BXD06 | -0.431 | -1.212 |
| BXD07 | -0.8 | -1.905 |
| BXD08 | -0.212 | -1.813 |
| BXD09 | -0.77 | -0.932 |
| CAST | -0.309 | -0.701 |
| CCcont | -0.269 | -0.883 |
| DS01 | -0.749 | 0.272 |
| DS02 | -0.131 | -0.925 |
| DS04 | 0.052 | 0.824 |
| DS0c | 0.028 | 0.118 |
| GP01 | 0.375 | -0.313 |
| GP02 | -0.038 | 0.429 |
| GP0c | 0.431 | 1.536 |
| NOD | -0.478 | -0.122 |
| NZO | -0.436 | 0.842 |
| PWK | -0.324 | -0.597 |
| H37Rv_KO_CtpC | -0.457 | -0.357 |
| H37Rv_KO_CtpD | -0.163 | -0.33 |
| H37Rv_KO_Rv1272 | -1.147 | -1.469 |
| H37Rv_KO_SugABC | -0.581 | -1.338 |
| H37Rv_KO_MbtN | -1.595 | -0.865 |
| Trans05 | -0.208 | -1.674 |
| macrophage_unactivated | 0.234 | -0.568 |
| IL1 | -0.039 | -1.201 |
| Rapamycin | 0.0 | -1.182 |
| Tcell | 0.544 | -0.968 |
| GMCSF | -1.117 | -1.096 |
| IFNab | -1.179 | -0.928 |
| IFNg | -1.131 | -0.871 |
| IFNg_GMCSF1 | -0.732 | -1.436 |
| Rv1432_day32 | -0.527 | 0.495 |
| Rv1565c_day32 | -0.466 | -0.648 |
| secA2_input | -0.058 | -0.291 |
| delta_Rv3594 | -0.483 | -1.309 |
| delta_Rv3717 | -0.607 | 0.204 |
| delta_Rv3811 | -0.329 | -0.373 |
| delta_Rv0954 | -0.447 | 0.349 |
| PonA1 | 0.0 | -0.193 |
| EccD1_KO | 0.806 | 0.181 |
| EspI_KO | 0.322 | -0.853 |
| PE35_KO | 1.117 | -0.49 |
| PPE68_KO | 0.314 | -0.403 |
| glycerol2 | 0.989 | 2.169 |
| lignocerate | 1.299 | 2.979 |
| oleate | 0.064 | -0.658 |
| phosphatidylcholine | 1.015 | 2.657 |
| acetate | 1.127 | 2.675 |
| glucAc | 1.072 | 2.4 |
| Rv0950ko | 0.546 | 1.396 |
| Rv1096ko | 1.264 | 0.67 |
| Rv3684ko | -0.226 | 0.508 |
| delta_otsA_trehalose | 0.285 | -0.228 |