Top 10 genes with highest correlation to Rv0546c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1313c/- | (cc=0.5595) | info on Rv1313c/- |
| Rv3798/- | (cc=0.5069) | info on Rv3798/- |
| Rv2270/lppN | (cc=0.4793) | info on Rv2270/lppN |
| Rv0984/moaB2 | (cc=0.4719) | info on Rv0984/moaB2 |
| Rv0544c/- | (cc=0.4714) | info on Rv0544c/- |
| Rv0540/- | (cc=0.4686) | info on Rv0540/- |
| Rv0428c/- | (cc=0.4496) | info on Rv0428c/- |
| Rv2232/ptkA | (cc=0.4481) | info on Rv2232/ptkA |
| Rv1773c/- | (cc=0.4476) | info on Rv1773c/- |
| Rv1042c/- | (cc=0.4453) | info on Rv1042c/- |
Correlation of Rv0546c/- with Rv2270/lppN
Normalized LFCs for Rv0546c/-:
(description and provenance of datasets)
| Rv0546c/- | Rv2270/lppN | |
| Fe_supp_jason_reseq | -0.085 | 0.71 |
| low_pH_jason_reseq | -1.691 | -0.323 |
| NO_jason_reseq | -0.318 | -0.318 |
| B6_jason_reseq | 0.345 | 0.63 |
| MHCII_jason_reseq | 0.193 | -0.077 |
| Isoniazid02 | 0.016 | -0.26 |
| Rifampicin4 | 1.614 | 0.401 |
| Ethambutol3 | 0.377 | -0.185 |
| Meropenem3 | 0.714 | 0.398 |
| Vancomycin16 | 1.244 | 0.096 |
| Rv2680_day32 | -0.721 | 0.184 |
| H37Rv_KO_MarP | -0.158 | 0.459 |
| hypoxia_3wks | 1.998 | -0.315 |
| hypoxia_6wks | 1.422 | -0.031 |
| glycerol | 1.352 | 0.553 |
| cholesterol | 1.157 | -0.164 |
| AJ | -0.012 | -0.629 |
| Bibs02 | 0.307 | -1.25 |
| Bibs02c | 1.084 | 0.638 |
| BL6 | -0.634 | -1.299 |
| BL6a | 0.673 | -0.033 |
| BXD01 | -0.339 | -0.933 |
| BXD010 | -0.396 | 0.595 |
| BXD011 | 1.404 | 0.081 |
| BXD03 | -0.211 | -1.289 |
| BXD04 | 0.295 | -0.581 |
| BXD05 | 0.371 | 0.086 |
| BXD06 | -0.073 | -0.435 |
| BXD07 | -0.576 | -0.222 |
| BXD08 | -0.374 | -0.931 |
| BXD09 | -0.677 | -0.184 |
| CAST | 0.279 | -0.324 |
| CCcont | -0.251 | -1.924 |
| DS01 | -0.31 | -0.058 |
| DS02 | 0.698 | -0.246 |
| DS04 | -0.614 | -0.505 |
| DS0c | -0.011 | -0.284 |
| GP01 | 0.293 | -0.614 |
| GP02 | 0.027 | -0.102 |
| GP0c | -0.178 | -0.734 |
| NOD | 0.693 | 0.805 |
| NZO | -0.646 | -0.964 |
| PWK | 0.719 | 0.033 |
| H37Rv_KO_CtpC | -1.051 | 0.104 |
| H37Rv_KO_CtpD | 0.207 | -0.251 |
| H37Rv_KO_Rv1272 | -0.844 | 0.998 |
| H37Rv_KO_SugABC | -0.412 | 0.159 |
| H37Rv_KO_MbtN | 1.01 | -0.597 |
| Trans05 | -0.709 | 0.103 |
| macrophage_unactivated | -1.376 | -0.376 |
| IL1 | -1.688 | 0.273 |
| Rapamycin | -1.252 | -0.761 |
| Tcell | -0.736 | -0.124 |
| GMCSF | 0.026 | -0.597 |
| IFNab | 0.644 | -0.057 |
| IFNg | -0.77 | 0.43 |
| IFNg_GMCSF1 | -2.093 | 0.346 |
| Rv1432_day32 | 1.572 | 0.621 |
| Rv1565c_day32 | -1.366 | -1.199 |
| secA2_input | -0.308 | -1.276 |
| delta_Rv3594 | 1.574 | 1.115 |
| delta_Rv3717 | 1.432 | 0.203 |
| delta_Rv3811 | 1.459 | 1.715 |
| delta_Rv0954 | 0.381 | 0.048 |
| PonA1 | 0.304 | -0.235 |
| EccD1_KO | 1.296 | 1.579 |
| EspI_KO | 1.417 | 1.845 |
| PE35_KO | 2.1 | 3.106 |
| PPE68_KO | 2.019 | 3.318 |
| glycerol2 | 0.408 | -1.544 |
| lignocerate | 0.023 | -2.176 |
| oleate | -1.141 | -1.198 |
| phosphatidylcholine | -0.563 | -1.751 |
| acetate | -0.527 | -2.622 |
| glucAc | -0.61 | -2.001 |
| Rv0950ko | 0.121 | 0.464 |
| Rv1096ko | 0.754 | -0.341 |
| Rv3684ko | 1.087 | -0.144 |
| delta_otsA_trehalose | 0.658 | 0.272 |