Top 10 genes with highest correlation to Rv0546c/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv1313c/- | (cc=0.5595) | info on Rv1313c/- |
Rv3798/- | (cc=0.5069) | info on Rv3798/- |
Rv2270/lppN | (cc=0.4793) | info on Rv2270/lppN |
Rv0984/moaB2 | (cc=0.4719) | info on Rv0984/moaB2 |
Rv0544c/- | (cc=0.4714) | info on Rv0544c/- |
Rv0540/- | (cc=0.4686) | info on Rv0540/- |
Rv0428c/- | (cc=0.4496) | info on Rv0428c/- |
Rv2232/ptkA | (cc=0.4481) | info on Rv2232/ptkA |
Rv1773c/- | (cc=0.4476) | info on Rv1773c/- |
Rv1042c/- | (cc=0.4453) | info on Rv1042c/- |
Correlation of Rv0546c/- with Rv1773c/-
Normalized LFCs for Rv0546c/-:
(description and provenance of datasets)
Rv0546c/- | Rv1773c/- | |
Fe_supp_jason_reseq | -0.085 | -0.237 |
low_pH_jason_reseq | -1.691 | -1.643 |
NO_jason_reseq | -0.318 | -0.142 |
B6_jason_reseq | 0.345 | 0.431 |
MHCII_jason_reseq | 0.193 | 0.339 |
Isoniazid02 | 0.016 | -0.08 |
Rifampicin4 | 1.614 | 0.352 |
Ethambutol3 | 0.377 | 0.331 |
Meropenem3 | 0.714 | 0.877 |
Vancomycin16 | 1.244 | 0.411 |
Rv2680_day32 | -0.721 | -0.134 |
H37Rv_KO_MarP | -0.158 | -0.656 |
hypoxia_3wks | 1.998 | 0.534 |
hypoxia_6wks | 1.422 | -0.522 |
glycerol | 1.352 | -0.054 |
cholesterol | 1.157 | -0.191 |
AJ | -0.012 | 0.326 |
Bibs02 | 0.307 | -1.025 |
Bibs02c | 1.084 | 0.638 |
BL6 | -0.634 | -2.082 |
BL6a | 0.673 | -0.017 |
BXD01 | -0.339 | -0.133 |
BXD010 | -0.396 | -0.082 |
BXD011 | 1.404 | 0.471 |
BXD03 | -0.211 | -0.55 |
BXD04 | 0.295 | -0.163 |
BXD05 | 0.371 | -0.261 |
BXD06 | -0.073 | 0.08 |
BXD07 | -0.576 | 0.467 |
BXD08 | -0.374 | 0.0 |
BXD09 | -0.677 | 0.0 |
CAST | 0.279 | 0.0 |
CCcont | -0.251 | -2.36 |
DS01 | -0.31 | -0.287 |
DS02 | 0.698 | -0.745 |
DS04 | -0.614 | 0.901 |
DS0c | -0.011 | -0.539 |
GP01 | 0.293 | -0.615 |
GP02 | 0.027 | -0.152 |
GP0c | -0.178 | -0.295 |
NOD | 0.693 | 0.801 |
NZO | -0.646 | -0.146 |
PWK | 0.719 | -0.279 |
H37Rv_KO_CtpC | -1.051 | -0.537 |
H37Rv_KO_CtpD | 0.207 | -0.142 |
H37Rv_KO_Rv1272 | -0.844 | -0.668 |
H37Rv_KO_SugABC | -0.412 | 0.213 |
H37Rv_KO_MbtN | 1.01 | -0.292 |
Trans05 | -0.709 | 0.345 |
macrophage_unactivated | -1.376 | -0.524 |
IL1 | -1.688 | -0.653 |
Rapamycin | -1.252 | 0.752 |
Tcell | -0.736 | -0.316 |
GMCSF | 0.026 | 0.716 |
IFNab | 0.644 | 0.363 |
IFNg | -0.77 | -0.043 |
IFNg_GMCSF1 | -2.093 | -0.358 |
Rv1432_day32 | 1.572 | 0.802 |
Rv1565c_day32 | -1.366 | 0.477 |
secA2_input | -0.308 | 1.234 |
delta_Rv3594 | 1.574 | 1.475 |
delta_Rv3717 | 1.432 | 1.456 |
delta_Rv3811 | 1.459 | 0.5 |
delta_Rv0954 | 0.381 | 0.174 |
PonA1 | 0.304 | 1.26 |
EccD1_KO | 1.296 | 1.552 |
EspI_KO | 1.417 | 0.257 |
PE35_KO | 2.1 | 0.744 |
PPE68_KO | 2.019 | 1.347 |
glycerol2 | 0.408 | -0.566 |
lignocerate | 0.023 | -1.204 |
oleate | -1.141 | 0.132 |
phosphatidylcholine | -0.563 | -0.377 |
acetate | -0.527 | -0.946 |
glucAc | -0.61 | -1.891 |
Rv0950ko | 0.121 | 1.484 |
Rv1096ko | 0.754 | 1.885 |
Rv3684ko | 1.087 | 1.834 |
delta_otsA_trehalose | 0.658 | 0.063 |