Top 10 genes with highest correlation to Rv0544c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0545c/pitA | (cc=0.8747) | info on Rv0545c/pitA |
| Rv1339/- | (cc=0.6428) | info on Rv1339/- |
| Rv1008/tatD | (cc=0.5885) | info on Rv1008/tatD |
| Rv0019c/fhaB | (cc=0.5848) | info on Rv0019c/fhaB |
| Rv1780/- | (cc=0.5803) | info on Rv1780/- |
| Rv1640c/lysX | (cc=0.5755) | info on Rv1640c/lysX |
| Rv2841c/nusA | (cc=0.5742) | info on Rv2841c/nusA |
| Rv3821/- | (cc=0.5447) | info on Rv3821/- |
| Rv1058/fadD14 | (cc=0.5411) | info on Rv1058/fadD14 |
| Rv0238/- | (cc=0.5386) | info on Rv0238/- |
Correlation of Rv0544c/- with Rv2841c/nusA
Normalized LFCs for Rv0544c/-:
(description and provenance of datasets)
| Rv0544c/- | Rv2841c/nusA | |
| Fe_supp_jason_reseq | -1.268 | 0.0 |
| low_pH_jason_reseq | -1.909 | 0.0 |
| NO_jason_reseq | -1.352 | 0.0 |
| B6_jason_reseq | -1.389 | 0.0 |
| MHCII_jason_reseq | -2.092 | 0.0 |
| Isoniazid02 | 1.737 | -0.201 |
| Rifampicin4 | 1.985 | 0.0 |
| Ethambutol3 | 2.494 | 0.423 |
| Meropenem3 | -0.883 | -0.165 |
| Vancomycin16 | 1.202 | 0.0 |
| Rv2680_day32 | 1.357 | 0.0 |
| H37Rv_KO_MarP | -0.49 | 0.0 |
| hypoxia_3wks | 2.377 | 0.0 |
| hypoxia_6wks | 1.967 | 0.0 |
| glycerol | 3.296 | 0.202 |
| cholesterol | 0.784 | 0.509 |
| AJ | -1.282 | 0.0 |
| Bibs02 | -0.505 | 0.0 |
| Bibs02c | -0.577 | 0.0 |
| BL6 | -1.054 | 0.0 |
| BL6a | 1.072 | 0.0 |
| BXD01 | 1.487 | 0.0 |
| BXD010 | 1.207 | 0.0 |
| BXD011 | 1.554 | 0.0 |
| BXD03 | 0.295 | 0.0 |
| BXD04 | 0.232 | 0.0 |
| BXD05 | 1.689 | 0.0 |
| BXD06 | 1.051 | 0.0 |
| BXD07 | 1.162 | 0.0 |
| BXD08 | 0.425 | 0.0 |
| BXD09 | 0.68 | 0.0 |
| CAST | -1.94 | 0.439 |
| CCcont | 1.123 | 0.0 |
| DS01 | -0.231 | 0.83 |
| DS02 | -0.124 | 0.0 |
| DS04 | -0.734 | 0.0 |
| DS0c | -0.94 | 0.0 |
| GP01 | 0.524 | 0.0 |
| GP02 | 0.816 | 0.0 |
| GP0c | 0.733 | 0.0 |
| NOD | -1.627 | 0.225 |
| NZO | -1.371 | 0.0 |
| PWK | -1.495 | 0.0 |
| H37Rv_KO_CtpC | -0.093 | 0.571 |
| H37Rv_KO_CtpD | 0.754 | 0.0 |
| H37Rv_KO_Rv1272 | 1.23 | 0.0 |
| H37Rv_KO_SugABC | 1.435 | 0.0 |
| H37Rv_KO_MbtN | 1.603 | 0.103 |
| Trans05 | 1.718 | 0.131 |
| macrophage_unactivated | -1.184 | -2.14 |
| IL1 | -3.675 | -2.011 |
| Rapamycin | -4.367 | -2.081 |
| Tcell | -1.222 | -2.209 |
| GMCSF | -2.213 | -1.79 |
| IFNab | -0.723 | -2.05 |
| IFNg | -2.673 | -1.812 |
| IFNg_GMCSF1 | -4.682 | -2.13 |
| Rv1432_day32 | 1.531 | -1.124 |
| Rv1565c_day32 | -1.76 | 0.0 |
| secA2_input | -0.28 | -0.216 |
| delta_Rv3594 | 3.87 | 0.742 |
| delta_Rv3717 | 3.152 | 0.736 |
| delta_Rv3811 | 3.297 | 1.261 |
| delta_Rv0954 | 0.866 | 0.178 |
| PonA1 | -0.759 | 0.0 |
| EccD1_KO | -1.687 | -0.595 |
| EspI_KO | -1.124 | -0.799 |
| PE35_KO | -1.773 | -0.817 |
| PPE68_KO | -1.456 | -0.896 |
| glycerol2 | -0.524 | 0.0 |
| lignocerate | -1.784 | 0.0 |
| oleate | -1.466 | 0.0 |
| phosphatidylcholine | -2.284 | 0.0 |
| acetate | -0.773 | 0.0 |
| glucAc | 1.173 | 0.0 |
| Rv0950ko | 0.407 | 0.727 |
| Rv1096ko | -0.103 | 0.727 |
| Rv3684ko | 1.497 | 1.772 |
| delta_otsA_trehalose | 1.175 | 0.133 |