Top 10 genes with highest correlation to Rv0544c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0545c/pitA | (cc=0.8747) | info on Rv0545c/pitA |
| Rv1339/- | (cc=0.6428) | info on Rv1339/- |
| Rv1008/tatD | (cc=0.5885) | info on Rv1008/tatD |
| Rv0019c/fhaB | (cc=0.5848) | info on Rv0019c/fhaB |
| Rv1780/- | (cc=0.5803) | info on Rv1780/- |
| Rv1640c/lysX | (cc=0.5755) | info on Rv1640c/lysX |
| Rv2841c/nusA | (cc=0.5742) | info on Rv2841c/nusA |
| Rv3821/- | (cc=0.5447) | info on Rv3821/- |
| Rv1058/fadD14 | (cc=0.5411) | info on Rv1058/fadD14 |
| Rv0238/- | (cc=0.5386) | info on Rv0238/- |
Correlation of Rv0544c/- with Rv1339/-
Normalized LFCs for Rv0544c/-:
(description and provenance of datasets)
| Rv0544c/- | Rv1339/- | |
| Fe_supp_jason_reseq | -1.268 | 0.725 |
| low_pH_jason_reseq | -1.909 | -0.323 |
| NO_jason_reseq | -1.352 | -1.089 |
| B6_jason_reseq | -1.389 | -0.552 |
| MHCII_jason_reseq | -2.092 | 0.492 |
| Isoniazid02 | 1.737 | -0.773 |
| Rifampicin4 | 1.985 | 0.073 |
| Ethambutol3 | 2.494 | -0.597 |
| Meropenem3 | -0.883 | 0.586 |
| Vancomycin16 | 1.202 | 0.35 |
| Rv2680_day32 | 1.357 | 0.0 |
| H37Rv_KO_MarP | -0.49 | -2.406 |
| hypoxia_3wks | 2.377 | 4.865 |
| hypoxia_6wks | 1.967 | 6.0 |
| glycerol | 3.296 | -0.202 |
| cholesterol | 0.784 | -0.145 |
| AJ | -1.282 | 0.0 |
| Bibs02 | -0.505 | -0.183 |
| Bibs02c | -0.577 | -0.209 |
| BL6 | -1.054 | -0.125 |
| BL6a | 1.072 | 0.776 |
| BXD01 | 1.487 | 1.004 |
| BXD010 | 1.207 | 2.357 |
| BXD011 | 1.554 | 1.093 |
| BXD03 | 0.295 | 2.022 |
| BXD04 | 0.232 | 4.206 |
| BXD05 | 1.689 | 1.098 |
| BXD06 | 1.051 | 1.996 |
| BXD07 | 1.162 | 0.63 |
| BXD08 | 0.425 | 0.899 |
| BXD09 | 0.68 | 1.018 |
| CAST | -1.94 | -0.23 |
| CCcont | 1.123 | 3.245 |
| DS01 | -0.231 | -0.236 |
| DS02 | -0.124 | -0.217 |
| DS04 | -0.734 | 2.566 |
| DS0c | -0.94 | -0.217 |
| GP01 | 0.524 | -0.099 |
| GP02 | 0.816 | -0.083 |
| GP0c | 0.733 | 0.51 |
| NOD | -1.627 | -0.225 |
| NZO | -1.371 | -0.199 |
| PWK | -1.495 | -0.196 |
| H37Rv_KO_CtpC | -0.093 | 2.233 |
| H37Rv_KO_CtpD | 0.754 | 0.791 |
| H37Rv_KO_Rv1272 | 1.23 | 0.356 |
| H37Rv_KO_SugABC | 1.435 | 2.448 |
| H37Rv_KO_MbtN | 1.603 | 5.506 |
| Trans05 | 1.718 | 0.228 |
| macrophage_unactivated | -1.184 | -6.0 |
| IL1 | -3.675 | -4.242 |
| Rapamycin | -4.367 | -6.0 |
| Tcell | -1.222 | -4.774 |
| GMCSF | -2.213 | -5.365 |
| IFNab | -0.723 | 0.327 |
| IFNg | -2.673 | -3.555 |
| IFNg_GMCSF1 | -4.682 | -3.101 |
| Rv1432_day32 | 1.531 | 0.0 |
| Rv1565c_day32 | -1.76 | -0.182 |
| secA2_input | -0.28 | -3.035 |
| delta_Rv3594 | 3.87 | 4.748 |
| delta_Rv3717 | 3.152 | 5.474 |
| delta_Rv3811 | 3.297 | 4.579 |
| delta_Rv0954 | 0.866 | 1.096 |
| PonA1 | -0.759 | -0.717 |
| EccD1_KO | -1.687 | -4.746 |
| EspI_KO | -1.124 | -4.269 |
| PE35_KO | -1.773 | -5.061 |
| PPE68_KO | -1.456 | -4.086 |
| glycerol2 | -0.524 | -0.531 |
| lignocerate | -1.784 | -0.462 |
| oleate | -1.466 | 0.0 |
| phosphatidylcholine | -2.284 | -0.531 |
| acetate | -0.773 | -0.63 |
| glucAc | 1.173 | -0.392 |
| Rv0950ko | 0.407 | -2.376 |
| Rv1096ko | -0.103 | -1.65 |
| Rv3684ko | 1.497 | -2.898 |
| delta_otsA_trehalose | 1.175 | -0.055 |