Top 10 genes with highest correlation to Rv0544c/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv0545c/pitA | (cc=0.8747) | info on Rv0545c/pitA |
Rv1339/- | (cc=0.6428) | info on Rv1339/- |
Rv1008/tatD | (cc=0.5885) | info on Rv1008/tatD |
Rv0019c/fhaB | (cc=0.5848) | info on Rv0019c/fhaB |
Rv1780/- | (cc=0.5803) | info on Rv1780/- |
Rv1640c/lysX | (cc=0.5755) | info on Rv1640c/lysX |
Rv2841c/nusA | (cc=0.5742) | info on Rv2841c/nusA |
Rv3821/- | (cc=0.5447) | info on Rv3821/- |
Rv1058/fadD14 | (cc=0.5411) | info on Rv1058/fadD14 |
Rv0238/- | (cc=0.5386) | info on Rv0238/- |
Correlation of Rv0544c/- with Rv0545c/pitA
Normalized LFCs for Rv0544c/-:
(description and provenance of datasets)
Rv0544c/- | Rv0545c/pitA | |
Fe_supp_jason_reseq | -1.268 | -1.323 |
low_pH_jason_reseq | -1.909 | -1.251 |
NO_jason_reseq | -1.352 | -0.281 |
B6_jason_reseq | -1.389 | -1.496 |
MHCII_jason_reseq | -2.092 | -2.253 |
Isoniazid02 | 1.737 | 0.327 |
Rifampicin4 | 1.985 | 1.852 |
Ethambutol3 | 2.494 | 2.309 |
Meropenem3 | -0.883 | -0.543 |
Vancomycin16 | 1.202 | 1.51 |
Rv2680_day32 | 1.357 | 1.535 |
H37Rv_KO_MarP | -0.49 | -0.409 |
hypoxia_3wks | 2.377 | 2.536 |
hypoxia_6wks | 1.967 | 2.297 |
glycerol | 3.296 | 1.556 |
cholesterol | 0.784 | 1.387 |
AJ | -1.282 | -1.913 |
Bibs02 | -0.505 | -1.24 |
Bibs02c | -0.577 | -0.988 |
BL6 | -1.054 | 0.058 |
BL6a | 1.072 | -0.047 |
BXD01 | 1.487 | 0.744 |
BXD010 | 1.207 | 0.502 |
BXD011 | 1.554 | 0.997 |
BXD03 | 0.295 | 0.031 |
BXD04 | 0.232 | 0.968 |
BXD05 | 1.689 | 1.082 |
BXD06 | 1.051 | 0.523 |
BXD07 | 1.162 | 0.953 |
BXD08 | 0.425 | 0.408 |
BXD09 | 0.68 | 0.406 |
CAST | -1.94 | -1.668 |
CCcont | 1.123 | 1.485 |
DS01 | -0.231 | -1.116 |
DS02 | -0.124 | -0.654 |
DS04 | -0.734 | -0.645 |
DS0c | -0.94 | -1.904 |
GP01 | 0.524 | 1.292 |
GP02 | 0.816 | 0.797 |
GP0c | 0.733 | 1.451 |
NOD | -1.627 | -2.232 |
NZO | -1.371 | -1.982 |
PWK | -1.495 | -2.347 |
H37Rv_KO_CtpC | -0.093 | 0.554 |
H37Rv_KO_CtpD | 0.754 | -0.094 |
H37Rv_KO_Rv1272 | 1.23 | -0.296 |
H37Rv_KO_SugABC | 1.435 | 0.466 |
H37Rv_KO_MbtN | 1.603 | 2.907 |
Trans05 | 1.718 | 0.228 |
macrophage_unactivated | -1.184 | 0.167 |
IL1 | -3.675 | -2.966 |
Rapamycin | -4.367 | -2.547 |
Tcell | -1.222 | -1.274 |
GMCSF | -2.213 | -1.096 |
IFNab | -0.723 | 0.656 |
IFNg | -2.673 | -1.515 |
IFNg_GMCSF1 | -4.682 | -2.316 |
Rv1432_day32 | 1.531 | 1.248 |
Rv1565c_day32 | -1.76 | -1.767 |
secA2_input | -0.28 | 0.235 |
delta_Rv3594 | 3.87 | 3.341 |
delta_Rv3717 | 3.152 | 2.665 |
delta_Rv3811 | 3.297 | 2.822 |
delta_Rv0954 | 0.866 | 0.811 |
PonA1 | -0.759 | -1.154 |
EccD1_KO | -1.687 | -1.697 |
EspI_KO | -1.124 | -0.094 |
PE35_KO | -1.773 | -1.835 |
PPE68_KO | -1.456 | -2.013 |
glycerol2 | -0.524 | -0.964 |
lignocerate | -1.784 | -1.28 |
oleate | -1.466 | -1.49 |
phosphatidylcholine | -2.284 | -2.053 |
acetate | -0.773 | 0.831 |
glucAc | 1.173 | 0.099 |
Rv0950ko | 0.407 | -0.193 |
Rv1096ko | -0.103 | 0.32 |
Rv3684ko | 1.497 | 0.393 |
delta_otsA_trehalose | 1.175 | -0.671 |