Top 10 genes with highest correlation to Rv0521/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3395c/- | (cc=0.5659) | info on Rv3395c/- |
| Rv0984/moaB2 | (cc=0.5289) | info on Rv0984/moaB2 |
| Rv3056/dinP | (cc=0.5074) | info on Rv3056/dinP |
| Rv1182/papA3 | (cc=0.4976) | info on Rv1182/papA3 |
| Rv1956/higA | (cc=0.4963) | info on Rv1956/higA |
| Rv2499c/- | (cc=0.4957) | info on Rv2499c/- |
| Rv1325c/PE_PGRS24 | (cc=0.4955) | info on Rv1325c/PE_PGRS24 |
| Rv1070c/echA8 | (cc=0.4934) | info on Rv1070c/echA8 |
| Rv0089/- | (cc=0.4921) | info on Rv0089/- |
| Rv0066c/icd2 | (cc=0.4889) | info on Rv0066c/icd2 |
Correlation of Rv0521/- with Rv1956/higA
Normalized LFCs for Rv0521/-:
(description and provenance of datasets)
| Rv0521/- | Rv1956/higA | |
| Fe_supp_jason_reseq | 0.098 | -0.742 |
| low_pH_jason_reseq | -0.987 | 1.464 |
| NO_jason_reseq | 0.291 | 2.875 |
| B6_jason_reseq | -0.802 | 0.376 |
| MHCII_jason_reseq | -0.011 | -0.581 |
| Isoniazid02 | 0.383 | 2.526 |
| Rifampicin4 | 0.051 | 1.985 |
| Ethambutol3 | 1.378 | 0.595 |
| Meropenem3 | 0.409 | 2.692 |
| Vancomycin16 | 0.387 | 0.202 |
| Rv2680_day32 | 1.568 | -0.038 |
| H37Rv_KO_MarP | 2.427 | -0.137 |
| hypoxia_3wks | -0.08 | -1.531 |
| hypoxia_6wks | -1.432 | -1.115 |
| glycerol | -0.146 | -0.778 |
| cholesterol | -0.365 | -1.263 |
| AJ | -0.106 | -0.272 |
| Bibs02 | -1.917 | -1.34 |
| Bibs02c | -1.117 | -1.155 |
| BL6 | -0.467 | -0.652 |
| BL6a | -1.025 | -1.72 |
| BXD01 | -0.494 | -1.387 |
| BXD010 | -1.09 | -1.225 |
| BXD011 | -0.849 | -1.202 |
| BXD03 | -0.375 | -2.879 |
| BXD04 | -1.779 | -0.425 |
| BXD05 | -0.835 | -1.144 |
| BXD06 | -0.451 | -1.391 |
| BXD07 | -0.477 | -1.324 |
| BXD08 | -0.699 | -2.556 |
| BXD09 | -0.455 | -1.676 |
| CAST | -0.976 | -0.302 |
| CCcont | -0.367 | -1.021 |
| DS01 | -0.096 | -0.778 |
| DS02 | -0.325 | -0.458 |
| DS04 | 1.099 | -1.098 |
| DS0c | -0.919 | -0.784 |
| GP01 | -1.327 | -0.015 |
| GP02 | -0.524 | -2.073 |
| GP0c | -0.217 | -1.835 |
| NOD | -1.108 | -0.295 |
| NZO | -0.298 | -0.152 |
| PWK | 0.239 | -0.374 |
| H37Rv_KO_CtpC | 0.494 | -0.599 |
| H37Rv_KO_CtpD | -1.982 | -1.943 |
| H37Rv_KO_Rv1272 | -0.007 | -0.955 |
| H37Rv_KO_SugABC | -0.294 | -1.526 |
| H37Rv_KO_MbtN | 1.077 | 0.156 |
| Trans05 | -1.188 | -1.391 |
| macrophage_unactivated | -1.073 | -2.557 |
| IL1 | -1.655 | -2.933 |
| Rapamycin | -0.973 | -3.339 |
| Tcell | -1.776 | -0.899 |
| GMCSF | -1.616 | -2.448 |
| IFNab | -1.273 | -3.997 |
| IFNg | -0.788 | -2.189 |
| IFNg_GMCSF1 | -0.826 | -1.939 |
| Rv1432_day32 | -0.819 | 1.446 |
| Rv1565c_day32 | -0.855 | -1.537 |
| secA2_input | 0.0 | 0.194 |
| delta_Rv3594 | 0.716 | 0.419 |
| delta_Rv3717 | 1.503 | 1.263 |
| delta_Rv3811 | 1.615 | 0.983 |
| delta_Rv0954 | 0.472 | -0.239 |
| PonA1 | 0.869 | -0.254 |
| EccD1_KO | -0.086 | -0.257 |
| EspI_KO | 0.356 | -0.339 |
| PE35_KO | 0.341 | -0.134 |
| PPE68_KO | -0.198 | -0.301 |
| glycerol2 | 1.007 | 1.035 |
| lignocerate | 0.565 | -0.513 |
| oleate | 0.086 | -1.365 |
| phosphatidylcholine | 0.38 | -0.374 |
| acetate | 0.845 | 1.142 |
| glucAc | 0.743 | 1.641 |
| Rv0950ko | -0.684 | -0.561 |
| Rv1096ko | -1.46 | -0.383 |
| Rv3684ko | -1.238 | 0.36 |
| delta_otsA_trehalose | 0.698 | -0.05 |