Top 10 genes with highest correlation to Rv0521/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3395c/- | (cc=0.5659) | info on Rv3395c/- |
| Rv0984/moaB2 | (cc=0.5289) | info on Rv0984/moaB2 |
| Rv3056/dinP | (cc=0.5074) | info on Rv3056/dinP |
| Rv1182/papA3 | (cc=0.4976) | info on Rv1182/papA3 |
| Rv1956/higA | (cc=0.4963) | info on Rv1956/higA |
| Rv2499c/- | (cc=0.4957) | info on Rv2499c/- |
| Rv1325c/PE_PGRS24 | (cc=0.4955) | info on Rv1325c/PE_PGRS24 |
| Rv1070c/echA8 | (cc=0.4934) | info on Rv1070c/echA8 |
| Rv0089/- | (cc=0.4921) | info on Rv0089/- |
| Rv0066c/icd2 | (cc=0.4889) | info on Rv0066c/icd2 |
Correlation of Rv0521/- with Rv1182/papA3
Normalized LFCs for Rv0521/-:
(description and provenance of datasets)
| Rv0521/- | Rv1182/papA3 | |
| Fe_supp_jason_reseq | 0.098 | 0.169 |
| low_pH_jason_reseq | -0.987 | 0.915 |
| NO_jason_reseq | 0.291 | 0.478 |
| B6_jason_reseq | -0.802 | 1.789 |
| MHCII_jason_reseq | -0.011 | 1.842 |
| Isoniazid02 | 0.383 | 0.332 |
| Rifampicin4 | 0.051 | 0.0 |
| Ethambutol3 | 1.378 | 1.685 |
| Meropenem3 | 0.409 | -0.025 |
| Vancomycin16 | 0.387 | 0.212 |
| Rv2680_day32 | 1.568 | -0.193 |
| H37Rv_KO_MarP | 2.427 | 0.574 |
| hypoxia_3wks | -0.08 | -0.69 |
| hypoxia_6wks | -1.432 | -0.422 |
| glycerol | -0.146 | -0.038 |
| cholesterol | -0.365 | 0.461 |
| AJ | -0.106 | 0.197 |
| Bibs02 | -1.917 | 0.356 |
| Bibs02c | -1.117 | -0.136 |
| BL6 | -0.467 | -1.421 |
| BL6a | -1.025 | -1.221 |
| BXD01 | -0.494 | -1.839 |
| BXD010 | -1.09 | -0.665 |
| BXD011 | -0.849 | -1.4 |
| BXD03 | -0.375 | -1.347 |
| BXD04 | -1.779 | -1.975 |
| BXD05 | -0.835 | -1.256 |
| BXD06 | -0.451 | -1.566 |
| BXD07 | -0.477 | -1.599 |
| BXD08 | -0.699 | -1.241 |
| BXD09 | -0.455 | -1.4 |
| CAST | -0.976 | 0.155 |
| CCcont | -0.367 | -1.219 |
| DS01 | -0.096 | 0.385 |
| DS02 | -0.325 | 0.271 |
| DS04 | 1.099 | 0.756 |
| DS0c | -0.919 | 0.245 |
| GP01 | -1.327 | -1.394 |
| GP02 | -0.524 | -1.579 |
| GP0c | -0.217 | -1.63 |
| NOD | -1.108 | 0.952 |
| NZO | -0.298 | 0.013 |
| PWK | 0.239 | 0.668 |
| H37Rv_KO_CtpC | 0.494 | -0.624 |
| H37Rv_KO_CtpD | -1.982 | -1.918 |
| H37Rv_KO_Rv1272 | -0.007 | -0.952 |
| H37Rv_KO_SugABC | -0.294 | -0.837 |
| H37Rv_KO_MbtN | 1.077 | 0.122 |
| Trans05 | -1.188 | 0.191 |
| macrophage_unactivated | -1.073 | -2.039 |
| IL1 | -1.655 | -0.718 |
| Rapamycin | -0.973 | -0.967 |
| Tcell | -1.776 | -2.105 |
| GMCSF | -1.616 | -1.41 |
| IFNab | -1.273 | -1.953 |
| IFNg | -0.788 | -2.793 |
| IFNg_GMCSF1 | -0.826 | -1.609 |
| Rv1432_day32 | -0.819 | -0.508 |
| Rv1565c_day32 | -0.855 | 0.088 |
| secA2_input | 0.0 | 0.0 |
| delta_Rv3594 | 0.716 | 0.502 |
| delta_Rv3717 | 1.503 | -0.268 |
| delta_Rv3811 | 1.615 | 0.827 |
| delta_Rv0954 | 0.472 | 0.24 |
| PonA1 | 0.869 | -0.067 |
| EccD1_KO | -0.086 | 0.207 |
| EspI_KO | 0.356 | 0.75 |
| PE35_KO | 0.341 | 1.21 |
| PPE68_KO | -0.198 | 1.011 |
| glycerol2 | 1.007 | 0.518 |
| lignocerate | 0.565 | 0.728 |
| oleate | 0.086 | 0.071 |
| phosphatidylcholine | 0.38 | 0.171 |
| acetate | 0.845 | -0.153 |
| glucAc | 0.743 | -0.356 |
| Rv0950ko | -0.684 | -1.152 |
| Rv1096ko | -1.46 | -0.959 |
| Rv3684ko | -1.238 | -1.624 |
| delta_otsA_trehalose | 0.698 | -0.651 |