Top 10 genes with highest correlation to Rv0497/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1836c/- | (cc=0.6274) | info on Rv1836c/- |
| Rv3854c/ethA | (cc=0.6185) | info on Rv3854c/ethA |
| Rv1821/secA2 | (cc=0.6117) | info on Rv1821/secA2 |
| Rv1111c/- | (cc=0.6082) | info on Rv1111c/- |
| Rv2190c/- | (cc=0.5803) | info on Rv2190c/- |
| Rv2696c/- | (cc=0.529) | info on Rv2696c/- |
| Rv0385/- | (cc=0.5272) | info on Rv0385/- |
| Rv3207c/- | (cc=0.52) | info on Rv3207c/- |
| Rv2553c/- | (cc=0.5089) | info on Rv2553c/- |
| Rv0049/- | (cc=0.4992) | info on Rv0049/- |
Correlation of Rv0497/- with Rv1821/secA2
Normalized LFCs for Rv0497/-:
(description and provenance of datasets)
| Rv0497/- | Rv1821/secA2 | |
| Fe_supp_jason_reseq | 2.155 | 2.155 |
| low_pH_jason_reseq | -1.887 | -0.151 |
| NO_jason_reseq | 0.858 | -0.761 |
| B6_jason_reseq | -1.375 | -0.322 |
| MHCII_jason_reseq | -1.155 | 0.0 |
| Isoniazid02 | -1.622 | 0.105 |
| Rifampicin4 | -1.66 | -2.039 |
| Ethambutol3 | -0.19 | -1.437 |
| Meropenem3 | -1.154 | -1.288 |
| Vancomycin16 | -2.555 | -3.136 |
| Rv2680_day32 | 1.148 | 0.249 |
| H37Rv_KO_MarP | -3.88 | -4.953 |
| hypoxia_3wks | -1.244 | -1.571 |
| hypoxia_6wks | -1.038 | -0.823 |
| glycerol | -1.24 | 0.385 |
| cholesterol | 0.748 | 1.678 |
| AJ | 0.487 | -0.815 |
| Bibs02 | -0.697 | -0.642 |
| Bibs02c | -1.773 | -0.336 |
| BL6 | 0.731 | -0.077 |
| BL6a | -0.755 | -0.185 |
| BXD01 | 0.209 | -0.256 |
| BXD010 | 0.518 | 0.276 |
| BXD011 | 0.54 | 0.21 |
| BXD03 | 0.377 | -0.863 |
| BXD04 | 0.524 | 0.409 |
| BXD05 | -0.354 | -0.171 |
| BXD06 | 0.248 | 0.04 |
| BXD07 | 0.786 | -0.375 |
| BXD08 | -0.4 | 0.0 |
| BXD09 | 0.622 | -0.131 |
| CAST | -2.853 | -1.118 |
| CCcont | 1.016 | 2.352 |
| DS01 | -1.001 | 0.07 |
| DS02 | -0.129 | 0.9 |
| DS04 | -0.115 | -0.059 |
| DS0c | -0.826 | 0.245 |
| GP01 | 1.52 | 0.408 |
| GP02 | -0.025 | -0.861 |
| GP0c | 1.579 | 0.564 |
| NOD | -2.39 | -0.441 |
| NZO | 0.727 | -0.54 |
| PWK | 2.552 | -0.06 |
| H37Rv_KO_CtpC | 0.092 | -0.788 |
| H37Rv_KO_CtpD | 0.235 | -0.295 |
| H37Rv_KO_Rv1272 | 0.824 | 0.434 |
| H37Rv_KO_SugABC | 2.212 | 1.204 |
| H37Rv_KO_MbtN | 3.528 | 1.345 |
| Trans05 | 1.205 | 0.459 |
| macrophage_unactivated | -0.514 | 0.922 |
| IL1 | 0.703 | 0.172 |
| Rapamycin | 0.157 | 0.746 |
| Tcell | -2.346 | 0.629 |
| GMCSF | 1.31 | -0.325 |
| IFNab | 2.53 | 0.81 |
| IFNg | 0.136 | 0.716 |
| IFNg_GMCSF1 | 1.618 | 0.091 |
| Rv1432_day32 | 2.092 | -0.227 |
| Rv1565c_day32 | -1.93 | -1.03 |
| secA2_input | -2.038 | -3.397 |
| delta_Rv3594 | 1.086 | 1.048 |
| delta_Rv3717 | 2.536 | 1.74 |
| delta_Rv3811 | 0.828 | 1.365 |
| delta_Rv0954 | -0.282 | -0.009 |
| PonA1 | -0.912 | -0.74 |
| EccD1_KO | -0.109 | -0.082 |
| EspI_KO | -0.719 | -0.311 |
| PE35_KO | -1.485 | -0.295 |
| PPE68_KO | -0.806 | 0.051 |
| glycerol2 | -0.177 | -1.017 |
| lignocerate | -0.32 | -1.736 |
| oleate | 0.457 | -0.878 |
| phosphatidylcholine | -0.176 | -1.448 |
| acetate | 0.0 | -0.115 |
| glucAc | 0.119 | -0.536 |
| Rv0950ko | -0.615 | -1.119 |
| Rv1096ko | 0.305 | -0.787 |
| Rv3684ko | -0.157 | -0.455 |
| delta_otsA_trehalose | -0.118 | -1.768 |