Top 10 genes with highest correlation to Rv0479c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1410c/- | (cc=0.4901) | info on Rv1410c/- |
| Rv2581c/- | (cc=0.4775) | info on Rv2581c/- |
| Rv2334/cysK1 | (cc=0.4572) | info on Rv2334/cysK1 |
| Rv2793c/truB | (cc=0.4569) | info on Rv2793c/truB |
| Rv1254/- | (cc=0.4554) | info on Rv1254/- |
| Rv0563/htpX | (cc=0.4508) | info on Rv0563/htpX |
| Rv2195/qcrA | (cc=0.4359) | info on Rv2195/qcrA |
| Rv0017c/rodA | (cc=0.4297) | info on Rv0017c/rodA |
| Rv2207/cobT | (cc=0.4225) | info on Rv2207/cobT |
| Rv1498c/- | (cc=0.4196) | info on Rv1498c/- |
Correlation of Rv0479c/- with Rv2793c/truB
Normalized LFCs for Rv0479c/-:
(description and provenance of datasets)
| Rv0479c/- | Rv2793c/truB | |
| Fe_supp_jason_reseq | 1.047 | -0.608 |
| low_pH_jason_reseq | 2.13 | 4.833 |
| NO_jason_reseq | -0.331 | 4.258 |
| B6_jason_reseq | -0.292 | -0.921 |
| MHCII_jason_reseq | -0.257 | -2.248 |
| Isoniazid02 | 0.311 | -1.823 |
| Rifampicin4 | -1.283 | -1.516 |
| Ethambutol3 | -0.676 | -3.205 |
| Meropenem3 | -0.883 | -2.159 |
| Vancomycin16 | -1.257 | -2.175 |
| Rv2680_day32 | 0.0 | -0.947 |
| H37Rv_KO_MarP | -1.696 | -1.139 |
| hypoxia_3wks | -0.55 | 0.0 |
| hypoxia_6wks | -0.288 | -0.163 |
| glycerol | 0.856 | 0.753 |
| cholesterol | 0.398 | -0.509 |
| AJ | 0.0 | 0.866 |
| Bibs02 | 0.0 | 0.0 |
| Bibs02c | 0.0 | 0.887 |
| BL6 | 0.0 | 1.039 |
| BL6a | 0.0 | 1.712 |
| BXD01 | 0.0 | 4.61 |
| BXD010 | 0.0 | 2.013 |
| BXD011 | 0.0 | 1.797 |
| BXD03 | 0.0 | 2.515 |
| BXD04 | 0.0 | 4.249 |
| BXD05 | 0.0 | 0.636 |
| BXD06 | 0.0 | 2.913 |
| BXD07 | 0.0 | 1.871 |
| BXD08 | 0.0 | 2.89 |
| BXD09 | 0.0 | 2.232 |
| CAST | 0.0 | 1.582 |
| CCcont | 0.525 | 1.291 |
| DS01 | 0.0 | 0.479 |
| DS02 | 0.0 | 0.922 |
| DS04 | 0.0 | 0.0 |
| DS0c | 0.0 | -0.547 |
| GP01 | 0.0 | -0.347 |
| GP02 | 0.0 | 0.06 |
| GP0c | 0.0 | -0.457 |
| NOD | 0.0 | -0.789 |
| NZO | 0.0 | 2.387 |
| PWK | 0.0 | 3.574 |
| H37Rv_KO_CtpC | 0.688 | 3.196 |
| H37Rv_KO_CtpD | 0.445 | 0.0 |
| H37Rv_KO_Rv1272 | 0.693 | 0.912 |
| H37Rv_KO_SugABC | 0.863 | 1.006 |
| H37Rv_KO_MbtN | 0.196 | 0.0 |
| Trans05 | 0.642 | 1.041 |
| macrophage_unactivated | -0.398 | -2.374 |
| IL1 | 0.0 | -1.056 |
| Rapamycin | 0.0 | -0.592 |
| Tcell | 0.0 | 0.808 |
| GMCSF | -0.694 | -1.605 |
| IFNab | -0.381 | -0.741 |
| IFNg | 0.0 | -0.249 |
| IFNg_GMCSF1 | -0.396 | -1.91 |
| Rv1432_day32 | 0.0 | -0.441 |
| Rv1565c_day32 | 0.0 | -1.579 |
| secA2_input | 0.25 | 1.404 |
| delta_Rv3594 | -1.459 | -3.694 |
| delta_Rv3717 | 0.113 | -2.848 |
| delta_Rv3811 | -0.836 | -2.974 |
| delta_Rv0954 | -1.769 | -3.46 |
| PonA1 | -0.054 | -0.035 |
| EccD1_KO | 0.664 | 0.0 |
| EspI_KO | 0.75 | 0.305 |
| PE35_KO | 0.939 | 0.601 |
| PPE68_KO | -0.237 | 1.501 |
| glycerol2 | 0.0 | -1.401 |
| lignocerate | 0.0 | -0.947 |
| oleate | 0.0 | -1.596 |
| phosphatidylcholine | 0.0 | -1.239 |
| acetate | 0.229 | 0.535 |
| glucAc | 0.272 | 1.065 |
| Rv0950ko | 2.044 | 0.139 |
| Rv1096ko | 0.793 | -1.113 |
| Rv3684ko | 0.0 | -0.314 |
| delta_otsA_trehalose | -0.431 | 0.0 |