TnSeqCorr

Top 10 genes with highest correlation to Rv0479c/-:

update plotcorrelationlink to info on gene
Rv1410c/- (cc=0.4901) info on Rv1410c/-
Rv2581c/- (cc=0.4775) info on Rv2581c/-
Rv2334/cysK1 (cc=0.4572) info on Rv2334/cysK1
Rv2793c/truB (cc=0.4569) info on Rv2793c/truB
Rv1254/- (cc=0.4554) info on Rv1254/-
Rv0563/htpX (cc=0.4508) info on Rv0563/htpX
Rv2195/qcrA (cc=0.4359) info on Rv2195/qcrA
Rv0017c/rodA (cc=0.4297) info on Rv0017c/rodA
Rv2207/cobT (cc=0.4225) info on Rv2207/cobT
Rv1498c/- (cc=0.4196) info on Rv1498c/-

Correlation of Rv0479c/- with Rv2581c/-

Normalized LFCs for Rv0479c/-:
(description and provenance of datasets)
Rv0479c/-Rv2581c/-
Fe_supp_jason_reseq

1.047

1.796

low_pH_jason_reseq

2.13

1.282

NO_jason_reseq

-0.331

0.0

B6_jason_reseq

-0.292

0.153

MHCII_jason_reseq

-0.257

0.0

Isoniazid02

0.311

0.0

Rifampicin4

-1.283

0.0

Ethambutol3

-0.676

0.0

Meropenem3

-0.883

0.0

Vancomycin16

-1.257

0.0

Rv2680_day32

0.0

0.0

H37Rv_KO_MarP

-1.696

-0.195

hypoxia_3wks

-0.55

-1.511

hypoxia_6wks

-0.288

-0.24

glycerol

0.856

0.0

cholesterol

0.398

0.0

AJ

0.0

0.0

Bibs02

0.0

0.0

Bibs02c

0.0

0.0

BL6

0.0

0.0

BL6a

0.0

0.696

BXD01

0.0

0.0

BXD010

0.0

0.0

BXD011

0.0

0.0

BXD03

0.0

0.0

BXD04

0.0

0.236

BXD05

0.0

0.256

BXD06

0.0

0.0

BXD07

0.0

0.0

BXD08

0.0

0.133

BXD09

0.0

0.386

CAST

0.0

0.0

CCcont

0.525

1.43

DS01

0.0

0.0

DS02

0.0

0.0

DS04

0.0

0.0

DS0c

0.0

0.0

GP01

0.0

0.0

GP02

0.0

0.0

GP0c

0.0

0.0

NOD

0.0

0.0

NZO

0.0

0.0

PWK

0.0

0.0

H37Rv_KO_CtpC

0.688

0.0

H37Rv_KO_CtpD

0.445

0.537

H37Rv_KO_Rv1272

0.693

0.0

H37Rv_KO_SugABC

0.863

0.099

H37Rv_KO_MbtN

0.196

0.0

Trans05

0.642

0.0

macrophage_unactivated

-0.398

0.436

IL1

0.0

0.0

Rapamycin

0.0

0.0

Tcell

0.0

0.45

GMCSF

-0.694

0.364

IFNab

-0.381

0.417

IFNg

0.0

0.0

IFNg_GMCSF1

-0.396

0.0

Rv1432_day32

0.0

0.0

Rv1565c_day32

0.0

-0.218

secA2_input

0.25

0.157

delta_Rv3594

-1.459

-1.649

delta_Rv3717

0.113

-2.25

delta_Rv3811

-0.836

-1.725

delta_Rv0954

-1.769

-2.31

PonA1

-0.054

1.526

EccD1_KO

0.664

2.654

EspI_KO

0.75

0.485

PE35_KO

0.939

0.496

PPE68_KO

-0.237

1.677

glycerol2

0.0

-1.401

lignocerate

0.0

-1.218

oleate

0.0

-1.418

phosphatidylcholine

0.0

-1.401

acetate

0.229

-0.856

glucAc

0.272

-0.532

Rv0950ko

2.044

1.462

Rv1096ko

0.793

2.045

Rv3684ko

0.0

1.916

delta_otsA_trehalose

-0.431

0.0