Top 10 genes with highest correlation to Rv0472c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0431/- | (cc=0.5212) | info on Rv0431/- |
| Rv0007/- | (cc=0.5126) | info on Rv0007/- |
| Rv2197c/- | (cc=0.5047) | info on Rv2197c/- |
| Rv1006/- | (cc=0.4991) | info on Rv1006/- |
| Rv3816c/- | (cc=0.4967) | info on Rv3816c/- |
| Rv0497/- | (cc=0.4816) | info on Rv0497/- |
| Rv1836c/- | (cc=0.4812) | info on Rv1836c/- |
| Rv3682/ponA2 | (cc=0.4772) | info on Rv3682/ponA2 |
| Rv2190c/- | (cc=0.4754) | info on Rv2190c/- |
| Rv2230c/- | (cc=0.4718) | info on Rv2230c/- |
Correlation of Rv0472c/- with Rv3682/ponA2
Normalized LFCs for Rv0472c/-:
(description and provenance of datasets)
| Rv0472c/- | Rv3682/ponA2 | |
| Fe_supp_jason_reseq | 2.703 | 2.333 |
| low_pH_jason_reseq | 0.144 | 0.862 |
| NO_jason_reseq | 2.507 | 0.735 |
| B6_jason_reseq | 1.759 | -0.246 |
| MHCII_jason_reseq | -1.661 | 0.189 |
| Isoniazid02 | -1.778 | -0.941 |
| Rifampicin4 | -6.0 | -6.0 |
| Ethambutol3 | -0.841 | 0.383 |
| Meropenem3 | -0.435 | -4.704 |
| Vancomycin16 | -6.0 | -6.0 |
| Rv2680_day32 | -1.562 | -1.468 |
| H37Rv_KO_MarP | -2.191 | 2.554 |
| hypoxia_3wks | -5.315 | -3.118 |
| hypoxia_6wks | -3.859 | -2.159 |
| glycerol | -1.701 | 0.054 |
| cholesterol | -0.847 | 0.315 |
| AJ | -2.496 | -1.388 |
| Bibs02 | -0.898 | 0.356 |
| Bibs02c | -1.364 | 0.671 |
| BL6 | -0.376 | -0.809 |
| BL6a | -0.499 | 0.053 |
| BXD01 | 0.519 | -1.496 |
| BXD010 | -1.191 | -1.577 |
| BXD011 | 0.935 | -0.592 |
| BXD03 | -1.959 | -0.875 |
| BXD04 | -2.103 | -1.42 |
| BXD05 | -0.975 | -1.087 |
| BXD06 | 0.752 | -1.533 |
| BXD07 | 0.422 | -1.383 |
| BXD08 | -1.431 | -1.424 |
| BXD09 | 1.69 | -1.614 |
| CAST | -3.515 | -2.644 |
| CCcont | 1.649 | 2.728 |
| DS01 | -2.306 | -1.528 |
| DS02 | -2.847 | -1.301 |
| DS04 | -1.479 | -0.6 |
| DS0c | -0.878 | 1.051 |
| GP01 | -0.715 | 0.527 |
| GP02 | -1.089 | -0.775 |
| GP0c | -1.095 | -0.659 |
| NOD | -3.092 | -1.814 |
| NZO | -2.745 | -1.731 |
| PWK | -3.157 | -2.416 |
| H37Rv_KO_CtpC | -1.747 | 0.703 |
| H37Rv_KO_CtpD | 0.024 | -0.392 |
| H37Rv_KO_Rv1272 | -1.846 | -1.409 |
| H37Rv_KO_SugABC | 0.985 | 0.769 |
| H37Rv_KO_MbtN | 1.138 | 0.201 |
| Trans05 | -1.628 | -0.782 |
| macrophage_unactivated | -0.117 | 1.016 |
| IL1 | 2.251 | -0.572 |
| Rapamycin | 1.562 | 0.353 |
| Tcell | 0.293 | -1.098 |
| GMCSF | 2.281 | -0.161 |
| IFNab | -1.291 | 0.973 |
| IFNg | 2.173 | -0.901 |
| IFNg_GMCSF1 | -0.06 | -0.396 |
| Rv1432_day32 | 5.497 | -0.763 |
| Rv1565c_day32 | -0.199 | 6.0 |
| secA2_input | -1.476 | 1.645 |
| delta_Rv3594 | 1.51 | 1.034 |
| delta_Rv3717 | 3.272 | -0.876 |
| delta_Rv3811 | 0.691 | 0.193 |
| delta_Rv0954 | 0.649 | 1.442 |
| PonA1 | -3.19 | -4.498 |
| EccD1_KO | -3.562 | -2.434 |
| EspI_KO | -3.488 | -1.891 |
| PE35_KO | -4.005 | -1.006 |
| PPE68_KO | -3.43 | 0.573 |
| glycerol2 | 0.0 | -2.071 |
| lignocerate | 0.0 | -1.006 |
| oleate | 0.196 | -3.116 |
| phosphatidylcholine | 0.193 | -2.3 |
| acetate | 0.0 | 0.595 |
| glucAc | 1.176 | 0.056 |
| Rv0950ko | -1.137 | -0.591 |
| Rv1096ko | -2.871 | -3.553 |
| Rv3684ko | 1.667 | 1.136 |
| delta_otsA_trehalose | -1.79 | -0.184 |