Top 10 genes with highest correlation to Rv0472c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0431/- | (cc=0.5212) | info on Rv0431/- |
| Rv0007/- | (cc=0.5126) | info on Rv0007/- |
| Rv2197c/- | (cc=0.5047) | info on Rv2197c/- |
| Rv1006/- | (cc=0.4991) | info on Rv1006/- |
| Rv3816c/- | (cc=0.4967) | info on Rv3816c/- |
| Rv0497/- | (cc=0.4816) | info on Rv0497/- |
| Rv1836c/- | (cc=0.4812) | info on Rv1836c/- |
| Rv3682/ponA2 | (cc=0.4772) | info on Rv3682/ponA2 |
| Rv2190c/- | (cc=0.4754) | info on Rv2190c/- |
| Rv2230c/- | (cc=0.4718) | info on Rv2230c/- |
Correlation of Rv0472c/- with Rv0007/-
Normalized LFCs for Rv0472c/-:
(description and provenance of datasets)
| Rv0472c/- | Rv0007/- | |
| Fe_supp_jason_reseq | 2.703 | 1.163 |
| low_pH_jason_reseq | 0.144 | -0.539 |
| NO_jason_reseq | 2.507 | -0.845 |
| B6_jason_reseq | 1.759 | -0.229 |
| MHCII_jason_reseq | -1.661 | 0.603 |
| Isoniazid02 | -1.778 | -0.535 |
| Rifampicin4 | -6.0 | -6.0 |
| Ethambutol3 | -0.841 | -0.824 |
| Meropenem3 | -0.435 | -3.279 |
| Vancomycin16 | -6.0 | -5.709 |
| Rv2680_day32 | -1.562 | -0.595 |
| H37Rv_KO_MarP | -2.191 | 1.208 |
| hypoxia_3wks | -5.315 | -2.644 |
| hypoxia_6wks | -3.859 | -3.733 |
| glycerol | -1.701 | -0.762 |
| cholesterol | -0.847 | 0.688 |
| AJ | -2.496 | -0.876 |
| Bibs02 | -0.898 | -0.775 |
| Bibs02c | -1.364 | 0.129 |
| BL6 | -0.376 | 1.282 |
| BL6a | -0.499 | -0.659 |
| BXD01 | 0.519 | -0.615 |
| BXD010 | -1.191 | -1.598 |
| BXD011 | 0.935 | -0.666 |
| BXD03 | -1.959 | -1.429 |
| BXD04 | -2.103 | -1.307 |
| BXD05 | -0.975 | -1.109 |
| BXD06 | 0.752 | -1.533 |
| BXD07 | 0.422 | -1.241 |
| BXD08 | -1.431 | -1.527 |
| BXD09 | 1.69 | -0.295 |
| CAST | -3.515 | -2.644 |
| CCcont | 1.649 | 1.962 |
| DS01 | -2.306 | -1.637 |
| DS02 | -2.847 | -0.821 |
| DS04 | -1.479 | -0.408 |
| DS0c | -0.878 | -0.372 |
| GP01 | -0.715 | 0.031 |
| GP02 | -1.089 | -0.955 |
| GP0c | -1.095 | -0.75 |
| NOD | -3.092 | -2.013 |
| NZO | -2.745 | -0.269 |
| PWK | -3.157 | -1.91 |
| H37Rv_KO_CtpC | -1.747 | -0.85 |
| H37Rv_KO_CtpD | 0.024 | -0.537 |
| H37Rv_KO_Rv1272 | -1.846 | -1.163 |
| H37Rv_KO_SugABC | 0.985 | -0.518 |
| H37Rv_KO_MbtN | 1.138 | 0.404 |
| Trans05 | -1.628 | -0.683 |
| macrophage_unactivated | -0.117 | -0.161 |
| IL1 | 2.251 | -0.635 |
| Rapamycin | 1.562 | -0.838 |
| Tcell | 0.293 | -0.336 |
| GMCSF | 2.281 | -0.882 |
| IFNab | -1.291 | 0.0 |
| IFNg | 2.173 | -1.066 |
| IFNg_GMCSF1 | -0.06 | 0.0 |
| Rv1432_day32 | 5.497 | -0.18 |
| Rv1565c_day32 | -0.199 | 6.0 |
| secA2_input | -1.476 | -0.65 |
| delta_Rv3594 | 1.51 | 1.193 |
| delta_Rv3717 | 3.272 | 0.115 |
| delta_Rv3811 | 0.691 | 0.99 |
| delta_Rv0954 | 0.649 | 1.81 |
| PonA1 | -3.19 | -3.696 |
| EccD1_KO | -3.562 | -1.842 |
| EspI_KO | -3.488 | -1.705 |
| PE35_KO | -4.005 | -0.817 |
| PPE68_KO | -3.43 | 0.019 |
| glycerol2 | 0.0 | -1.369 |
| lignocerate | 0.0 | -1.084 |
| oleate | 0.196 | -2.451 |
| phosphatidylcholine | 0.193 | -2.422 |
| acetate | 0.0 | 0.286 |
| glucAc | 1.176 | -0.176 |
| Rv0950ko | -1.137 | -1.342 |
| Rv1096ko | -2.871 | -0.965 |
| Rv3684ko | 1.667 | 0.986 |
| delta_otsA_trehalose | -1.79 | -0.576 |