Top 10 genes with highest correlation to Rv0472c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0431/- | (cc=0.5212) | info on Rv0431/- |
| Rv0007/- | (cc=0.5126) | info on Rv0007/- |
| Rv2197c/- | (cc=0.5047) | info on Rv2197c/- |
| Rv1006/- | (cc=0.4991) | info on Rv1006/- |
| Rv3816c/- | (cc=0.4967) | info on Rv3816c/- |
| Rv0497/- | (cc=0.4816) | info on Rv0497/- |
| Rv1836c/- | (cc=0.4812) | info on Rv1836c/- |
| Rv3682/ponA2 | (cc=0.4772) | info on Rv3682/ponA2 |
| Rv2190c/- | (cc=0.4754) | info on Rv2190c/- |
| Rv2230c/- | (cc=0.4718) | info on Rv2230c/- |
Correlation of Rv0472c/- with Rv1006/-
Normalized LFCs for Rv0472c/-:
(description and provenance of datasets)
| Rv0472c/- | Rv1006/- | |
| Fe_supp_jason_reseq | 2.703 | 2.892 |
| low_pH_jason_reseq | 0.144 | 0.596 |
| NO_jason_reseq | 2.507 | -0.845 |
| B6_jason_reseq | 1.759 | -0.357 |
| MHCII_jason_reseq | -1.661 | 1.742 |
| Isoniazid02 | -1.778 | 0.071 |
| Rifampicin4 | -6.0 | -5.058 |
| Ethambutol3 | -0.841 | 0.766 |
| Meropenem3 | -0.435 | -1.508 |
| Vancomycin16 | -6.0 | -3.404 |
| Rv2680_day32 | -1.562 | -0.793 |
| H37Rv_KO_MarP | -2.191 | -2.348 |
| hypoxia_3wks | -5.315 | -0.574 |
| hypoxia_6wks | -3.859 | -1.84 |
| glycerol | -1.701 | 1.005 |
| cholesterol | -0.847 | 0.957 |
| AJ | -2.496 | -0.551 |
| Bibs02 | -0.898 | 0.828 |
| Bibs02c | -1.364 | 1.343 |
| BL6 | -0.376 | 0.462 |
| BL6a | -0.499 | 0.943 |
| BXD01 | 0.519 | 0.497 |
| BXD010 | -1.191 | -0.169 |
| BXD011 | 0.935 | -0.093 |
| BXD03 | -1.959 | 0.115 |
| BXD04 | -2.103 | 0.202 |
| BXD05 | -0.975 | -0.233 |
| BXD06 | 0.752 | -0.508 |
| BXD07 | 0.422 | -0.101 |
| BXD08 | -1.431 | 0.135 |
| BXD09 | 1.69 | 0.119 |
| CAST | -3.515 | -1.473 |
| CCcont | 1.649 | 1.936 |
| DS01 | -2.306 | 0.491 |
| DS02 | -2.847 | 0.775 |
| DS04 | -1.479 | 0.197 |
| DS0c | -0.878 | 1.328 |
| GP01 | -0.715 | -0.054 |
| GP02 | -1.089 | -0.712 |
| GP0c | -1.095 | -0.598 |
| NOD | -3.092 | -1.095 |
| NZO | -2.745 | -0.345 |
| PWK | -3.157 | -1.191 |
| H37Rv_KO_CtpC | -1.747 | 1.233 |
| H37Rv_KO_CtpD | 0.024 | 1.748 |
| H37Rv_KO_Rv1272 | -1.846 | 0.273 |
| H37Rv_KO_SugABC | 0.985 | 0.525 |
| H37Rv_KO_MbtN | 1.138 | 0.455 |
| Trans05 | -1.628 | -0.254 |
| macrophage_unactivated | -0.117 | 1.793 |
| IL1 | 2.251 | -0.154 |
| Rapamycin | 1.562 | 1.114 |
| Tcell | 0.293 | 0.166 |
| GMCSF | 2.281 | 0.626 |
| IFNab | -1.291 | 0.444 |
| IFNg | 2.173 | 0.0 |
| IFNg_GMCSF1 | -0.06 | 0.314 |
| Rv1432_day32 | 5.497 | 0.228 |
| Rv1565c_day32 | -0.199 | 0.734 |
| secA2_input | -1.476 | -0.207 |
| delta_Rv3594 | 1.51 | 1.345 |
| delta_Rv3717 | 3.272 | 0.19 |
| delta_Rv3811 | 0.691 | 0.953 |
| delta_Rv0954 | 0.649 | 1.578 |
| PonA1 | -3.19 | 0.646 |
| EccD1_KO | -3.562 | -0.908 |
| EspI_KO | -3.488 | -0.445 |
| PE35_KO | -4.005 | -0.738 |
| PPE68_KO | -3.43 | 0.182 |
| glycerol2 | 0.0 | -0.553 |
| lignocerate | 0.0 | 0.308 |
| oleate | 0.196 | 0.0 |
| phosphatidylcholine | 0.193 | -0.021 |
| acetate | 0.0 | 0.025 |
| glucAc | 1.176 | -0.269 |
| Rv0950ko | -1.137 | -2.439 |
| Rv1096ko | -2.871 | -1.384 |
| Rv3684ko | 1.667 | -0.229 |
| delta_otsA_trehalose | -1.79 | -0.348 |