Top 10 genes with highest correlation to Rv0472c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0431/- | (cc=0.5212) | info on Rv0431/- |
| Rv0007/- | (cc=0.5126) | info on Rv0007/- |
| Rv2197c/- | (cc=0.5047) | info on Rv2197c/- |
| Rv1006/- | (cc=0.4991) | info on Rv1006/- |
| Rv3816c/- | (cc=0.4967) | info on Rv3816c/- |
| Rv0497/- | (cc=0.4816) | info on Rv0497/- |
| Rv1836c/- | (cc=0.4812) | info on Rv1836c/- |
| Rv3682/ponA2 | (cc=0.4772) | info on Rv3682/ponA2 |
| Rv2190c/- | (cc=0.4754) | info on Rv2190c/- |
| Rv2230c/- | (cc=0.4718) | info on Rv2230c/- |
Correlation of Rv0472c/- with Rv0431/-
Normalized LFCs for Rv0472c/-:
(description and provenance of datasets)
| Rv0472c/- | Rv0431/- | |
| Fe_supp_jason_reseq | 2.703 | 0.751 |
| low_pH_jason_reseq | 0.144 | 1.305 |
| NO_jason_reseq | 2.507 | -0.436 |
| B6_jason_reseq | 1.759 | 0.695 |
| MHCII_jason_reseq | -1.661 | 0.0 |
| Isoniazid02 | -1.778 | -2.043 |
| Rifampicin4 | -6.0 | -4.04 |
| Ethambutol3 | -0.841 | -0.832 |
| Meropenem3 | -0.435 | -2.146 |
| Vancomycin16 | -6.0 | -2.918 |
| Rv2680_day32 | -1.562 | 2.141 |
| H37Rv_KO_MarP | -2.191 | -3.466 |
| hypoxia_3wks | -5.315 | -0.439 |
| hypoxia_6wks | -3.859 | -0.075 |
| glycerol | -1.701 | -1.583 |
| cholesterol | -0.847 | 0.082 |
| AJ | -2.496 | -1.193 |
| Bibs02 | -0.898 | 1.477 |
| Bibs02c | -1.364 | 1.117 |
| BL6 | -0.376 | 1.154 |
| BL6a | -0.499 | 1.092 |
| BXD01 | 0.519 | 1.07 |
| BXD010 | -1.191 | 0.328 |
| BXD011 | 0.935 | 0.236 |
| BXD03 | -1.959 | -1.06 |
| BXD04 | -2.103 | 0.878 |
| BXD05 | -0.975 | 0.405 |
| BXD06 | 0.752 | 0.372 |
| BXD07 | 0.422 | 0.533 |
| BXD08 | -1.431 | 1.697 |
| BXD09 | 1.69 | 0.976 |
| CAST | -3.515 | -0.521 |
| CCcont | 1.649 | 2.676 |
| DS01 | -2.306 | 0.38 |
| DS02 | -2.847 | 0.403 |
| DS04 | -1.479 | 2.112 |
| DS0c | -0.878 | 1.724 |
| GP01 | -0.715 | -0.903 |
| GP02 | -1.089 | 0.603 |
| GP0c | -1.095 | -0.342 |
| NOD | -3.092 | -0.952 |
| NZO | -2.745 | -1.124 |
| PWK | -3.157 | -1.009 |
| H37Rv_KO_CtpC | -1.747 | 2.33 |
| H37Rv_KO_CtpD | 0.024 | -0.778 |
| H37Rv_KO_Rv1272 | -1.846 | -1.105 |
| H37Rv_KO_SugABC | 0.985 | 0.972 |
| H37Rv_KO_MbtN | 1.138 | 4.38 |
| Trans05 | -1.628 | -0.295 |
| macrophage_unactivated | -0.117 | 0.761 |
| IL1 | 2.251 | -0.742 |
| Rapamycin | 1.562 | -0.101 |
| Tcell | 0.293 | 1.378 |
| GMCSF | 2.281 | 2.081 |
| IFNab | -1.291 | -0.203 |
| IFNg | 2.173 | -0.567 |
| IFNg_GMCSF1 | -0.06 | -0.104 |
| Rv1432_day32 | 5.497 | 0.488 |
| Rv1565c_day32 | -0.199 | 0.55 |
| secA2_input | -1.476 | -2.829 |
| delta_Rv3594 | 1.51 | 0.84 |
| delta_Rv3717 | 3.272 | 1.47 |
| delta_Rv3811 | 0.691 | -0.086 |
| delta_Rv0954 | 0.649 | -1.55 |
| PonA1 | -3.19 | -0.608 |
| EccD1_KO | -3.562 | -2.611 |
| EspI_KO | -3.488 | -3.268 |
| PE35_KO | -4.005 | -1.978 |
| PPE68_KO | -3.43 | -1.635 |
| glycerol2 | 0.0 | 1.513 |
| lignocerate | 0.0 | 2.66 |
| oleate | 0.196 | -0.248 |
| phosphatidylcholine | 0.193 | 2.507 |
| acetate | 0.0 | 1.127 |
| glucAc | 1.176 | 1.49 |
| Rv0950ko | -1.137 | -3.401 |
| Rv1096ko | -2.871 | -3.402 |
| Rv3684ko | 1.667 | 2.021 |
| delta_otsA_trehalose | -1.79 | 0.081 |