Top 10 genes with highest correlation to Rv0466/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1058/fadD14 | (cc=0.6037) | info on Rv1058/fadD14 |
| Rv0019c/fhaB | (cc=0.6035) | info on Rv0019c/fhaB |
| Rv1640c/lysX | (cc=0.6028) | info on Rv1640c/lysX |
| Rv0644c/mmaA2 | (cc=0.59) | info on Rv0644c/mmaA2 |
| Rv3050c/- | (cc=0.5671) | info on Rv3050c/- |
| Rv1780/- | (cc=0.5652) | info on Rv1780/- |
| Rv0018c/pstP | (cc=0.5592) | info on Rv0018c/pstP |
| Rv1213/glgC | (cc=0.551) | info on Rv1213/glgC |
| Rv0645c/mmaA1 | (cc=0.5467) | info on Rv0645c/mmaA1 |
| Rv2197c/- | (cc=0.545) | info on Rv2197c/- |
Correlation of Rv0466/- with Rv1640c/lysX
Normalized LFCs for Rv0466/-:
(description and provenance of datasets)
| Rv0466/- | Rv1640c/lysX | |
| Fe_supp_jason_reseq | -0.219 | 0.77 |
| low_pH_jason_reseq | 0.171 | -1.434 |
| NO_jason_reseq | -4.762 | -0.058 |
| B6_jason_reseq | -0.107 | 1.258 |
| MHCII_jason_reseq | 0.798 | 0.159 |
| Isoniazid02 | -0.112 | -1.263 |
| Rifampicin4 | -0.265 | -3.187 |
| Ethambutol3 | -0.258 | -2.24 |
| Meropenem3 | 0.871 | 0.879 |
| Vancomycin16 | -0.674 | -2.303 |
| Rv2680_day32 | 1.01 | 1.078 |
| H37Rv_KO_MarP | -2.88 | -2.764 |
| hypoxia_3wks | 2.727 | 4.366 |
| hypoxia_6wks | 5.101 | 3.111 |
| glycerol | 0.051 | -0.42 |
| cholesterol | 0.604 | -0.564 |
| AJ | -1.136 | -1.642 |
| Bibs02 | -0.477 | -0.498 |
| Bibs02c | -1.611 | 0.899 |
| BL6 | 1.673 | 0.906 |
| BL6a | 1.435 | 1.69 |
| BXD01 | 2.579 | 2.01 |
| BXD010 | 0.785 | 1.596 |
| BXD011 | 1.976 | 1.594 |
| BXD03 | -0.648 | 0.98 |
| BXD04 | 1.332 | 1.294 |
| BXD05 | 0.8 | 1.265 |
| BXD06 | 1.769 | 1.635 |
| BXD07 | 2.508 | 1.674 |
| BXD08 | 1.861 | 2.286 |
| BXD09 | 2.511 | 2.565 |
| CAST | -1.25 | -2.147 |
| CCcont | 1.062 | 1.12 |
| DS01 | -2.868 | 0.195 |
| DS02 | -0.64 | 0.247 |
| DS04 | 0.086 | 0.854 |
| DS0c | 0.311 | -0.115 |
| GP01 | 1.001 | 1.087 |
| GP02 | -0.022 | 1.427 |
| GP0c | -0.197 | 1.205 |
| NOD | -0.643 | -1.515 |
| NZO | -1.536 | -0.932 |
| PWK | -4.014 | -1.829 |
| H37Rv_KO_CtpC | -0.451 | 1.204 |
| H37Rv_KO_CtpD | 0.643 | 0.694 |
| H37Rv_KO_Rv1272 | 0.287 | 1.286 |
| H37Rv_KO_SugABC | 1.656 | 1.294 |
| H37Rv_KO_MbtN | 1.439 | 2.599 |
| Trans05 | 1.18 | 1.806 |
| macrophage_unactivated | 0.379 | -2.358 |
| IL1 | -0.196 | -1.465 |
| Rapamycin | -0.638 | -1.645 |
| Tcell | 2.597 | -1.147 |
| GMCSF | -0.628 | -1.719 |
| IFNab | -0.396 | -0.293 |
| IFNg | -1.451 | -0.919 |
| IFNg_GMCSF1 | -0.83 | -2.077 |
| Rv1432_day32 | 4.056 | 2.379 |
| Rv1565c_day32 | 2.088 | -2.854 |
| secA2_input | 1.043 | 0.864 |
| delta_Rv3594 | 1.023 | 1.628 |
| delta_Rv3717 | 2.863 | 3.157 |
| delta_Rv3811 | 1.254 | 1.46 |
| delta_Rv0954 | -0.421 | -0.261 |
| PonA1 | -1.885 | -0.856 |
| EccD1_KO | -0.49 | -1.332 |
| EspI_KO | 0.091 | -1.557 |
| PE35_KO | -0.12 | -2.15 |
| PPE68_KO | -0.186 | -1.296 |
| glycerol2 | 0.563 | -0.744 |
| lignocerate | -0.806 | -1.006 |
| oleate | -2.802 | -2.925 |
| phosphatidylcholine | -0.021 | -1.678 |
| acetate | -0.567 | 0.271 |
| glucAc | -0.437 | 0.236 |
| Rv0950ko | 0.157 | -1.128 |
| Rv1096ko | -1.698 | 0.093 |
| Rv3684ko | 1.205 | 1.055 |
| delta_otsA_trehalose | 0.17 | -0.468 |