Top 10 genes with highest correlation to Rv0466/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1058/fadD14 | (cc=0.6037) | info on Rv1058/fadD14 |
| Rv0019c/fhaB | (cc=0.6035) | info on Rv0019c/fhaB |
| Rv1640c/lysX | (cc=0.6028) | info on Rv1640c/lysX |
| Rv0644c/mmaA2 | (cc=0.59) | info on Rv0644c/mmaA2 |
| Rv3050c/- | (cc=0.5671) | info on Rv3050c/- |
| Rv1780/- | (cc=0.5652) | info on Rv1780/- |
| Rv0018c/pstP | (cc=0.5592) | info on Rv0018c/pstP |
| Rv1213/glgC | (cc=0.551) | info on Rv1213/glgC |
| Rv0645c/mmaA1 | (cc=0.5467) | info on Rv0645c/mmaA1 |
| Rv2197c/- | (cc=0.545) | info on Rv2197c/- |
Correlation of Rv0466/- with Rv1213/glgC
Normalized LFCs for Rv0466/-:
(description and provenance of datasets)
| Rv0466/- | Rv1213/glgC | |
| Fe_supp_jason_reseq | -0.219 | 1.738 |
| low_pH_jason_reseq | 0.171 | 0.211 |
| NO_jason_reseq | -4.762 | -1.822 |
| B6_jason_reseq | -0.107 | -0.029 |
| MHCII_jason_reseq | 0.798 | 1.146 |
| Isoniazid02 | -0.112 | -2.363 |
| Rifampicin4 | -0.265 | 0.42 |
| Ethambutol3 | -0.258 | 0.872 |
| Meropenem3 | 0.871 | -0.058 |
| Vancomycin16 | -0.674 | 1.106 |
| Rv2680_day32 | 1.01 | 0.58 |
| H37Rv_KO_MarP | -2.88 | 0.143 |
| hypoxia_3wks | 2.727 | 0.817 |
| hypoxia_6wks | 5.101 | 0.317 |
| glycerol | 0.051 | 0.654 |
| cholesterol | 0.604 | 0.509 |
| AJ | -1.136 | 0.044 |
| Bibs02 | -0.477 | -0.919 |
| Bibs02c | -1.611 | -0.253 |
| BL6 | 1.673 | 1.794 |
| BL6a | 1.435 | 1.616 |
| BXD01 | 2.579 | 2.336 |
| BXD010 | 0.785 | 1.141 |
| BXD011 | 1.976 | 1.917 |
| BXD03 | -0.648 | 0.599 |
| BXD04 | 1.332 | 1.792 |
| BXD05 | 0.8 | 2.113 |
| BXD06 | 1.769 | 1.856 |
| BXD07 | 2.508 | 2.329 |
| BXD08 | 1.861 | 1.038 |
| BXD09 | 2.511 | 2.264 |
| CAST | -1.25 | 0.21 |
| CCcont | 1.062 | 1.294 |
| DS01 | -2.868 | -1.187 |
| DS02 | -0.64 | -0.507 |
| DS04 | 0.086 | -0.804 |
| DS0c | 0.311 | -0.357 |
| GP01 | 1.001 | 2.523 |
| GP02 | -0.022 | 1.621 |
| GP0c | -0.197 | 2.633 |
| NOD | -0.643 | -0.369 |
| NZO | -1.536 | -0.663 |
| PWK | -4.014 | -0.237 |
| H37Rv_KO_CtpC | -0.451 | 1.824 |
| H37Rv_KO_CtpD | 0.643 | 1.648 |
| H37Rv_KO_Rv1272 | 0.287 | 2.6 |
| H37Rv_KO_SugABC | 1.656 | 1.91 |
| H37Rv_KO_MbtN | 1.439 | 3.22 |
| Trans05 | 1.18 | 2.491 |
| macrophage_unactivated | 0.379 | 0.218 |
| IL1 | -0.196 | -0.676 |
| Rapamycin | -0.638 | -0.608 |
| Tcell | 2.597 | 0.029 |
| GMCSF | -0.628 | -0.314 |
| IFNab | -0.396 | 0.405 |
| IFNg | -1.451 | -0.722 |
| IFNg_GMCSF1 | -0.83 | -0.405 |
| Rv1432_day32 | 4.056 | 1.425 |
| Rv1565c_day32 | 2.088 | 1.621 |
| secA2_input | 1.043 | 0.197 |
| delta_Rv3594 | 1.023 | 0.425 |
| delta_Rv3717 | 2.863 | 0.857 |
| delta_Rv3811 | 1.254 | 0.889 |
| delta_Rv0954 | -0.421 | -0.64 |
| PonA1 | -1.885 | -0.889 |
| EccD1_KO | -0.49 | 0.0 |
| EspI_KO | 0.091 | -0.068 |
| PE35_KO | -0.12 | 0.589 |
| PPE68_KO | -0.186 | 0.077 |
| glycerol2 | 0.563 | 0.216 |
| lignocerate | -0.806 | -0.572 |
| oleate | -2.802 | -1.092 |
| phosphatidylcholine | -0.021 | -1.211 |
| acetate | -0.567 | 0.123 |
| glucAc | -0.437 | -0.057 |
| Rv0950ko | 0.157 | 0.464 |
| Rv1096ko | -1.698 | 1.411 |
| Rv3684ko | 1.205 | 1.634 |
| delta_otsA_trehalose | 0.17 | 2.163 |