Top 10 genes with highest correlation to Rv0456A/mazF1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3163c/- | (cc=0.562) | info on Rv3163c/- |
| Rv0888/- | (cc=0.5245) | info on Rv0888/- |
| Rv3038c/- | (cc=0.4971) | info on Rv3038c/- |
| Rv0182c/sigG | (cc=0.4705) | info on Rv0182c/sigG |
| Rv2287/yjcE | (cc=0.4655) | info on Rv2287/yjcE |
| Rv1733c/- | (cc=0.4553) | info on Rv1733c/- |
| Rv0583c/lpqN | (cc=0.4476) | info on Rv0583c/lpqN |
| Rv1960c/parD1 | (cc=0.4465) | info on Rv1960c/parD1 |
| Rv2625c/- | (cc=0.4433) | info on Rv2625c/- |
| Rv2885c/- | (cc=0.4417) | info on Rv2885c/- |
Correlation of Rv0456A/mazF1 with Rv3163c/-
Normalized LFCs for Rv0456A/mazF1:
(description and provenance of datasets)
| Rv0456A/mazF1 | Rv3163c/- | |
| Fe_supp_jason_reseq | -1.814 | -0.385 |
| low_pH_jason_reseq | -0.56 | -0.325 |
| NO_jason_reseq | -0.609 | -0.113 |
| B6_jason_reseq | -0.231 | -0.465 |
| MHCII_jason_reseq | -0.245 | 0.309 |
| Isoniazid02 | -0.047 | -0.217 |
| Rifampicin4 | -0.051 | -0.214 |
| Ethambutol3 | -0.055 | 0.275 |
| Meropenem3 | -0.054 | 0.932 |
| Vancomycin16 | -0.066 | -0.175 |
| Rv2680_day32 | 1.591 | 1.318 |
| H37Rv_KO_MarP | 0.323 | 0.071 |
| hypoxia_3wks | -0.084 | 0.403 |
| hypoxia_6wks | -0.263 | 0.035 |
| glycerol | -0.654 | 0.62 |
| cholesterol | -1.105 | -0.188 |
| AJ | -0.182 | 0.118 |
| Bibs02 | 0.237 | -0.507 |
| Bibs02c | -0.185 | 0.336 |
| BL6 | 0.271 | -0.497 |
| BL6a | -0.518 | -0.053 |
| BXD01 | -0.128 | 0.709 |
| BXD010 | 0.166 | -0.081 |
| BXD011 | -0.669 | -0.591 |
| BXD03 | 0.738 | -0.591 |
| BXD04 | 0.249 | -1.105 |
| BXD05 | -0.06 | 0.256 |
| BXD06 | 0.077 | -0.213 |
| BXD07 | -0.062 | 0.082 |
| BXD08 | 0.143 | 0.849 |
| BXD09 | -0.34 | -0.313 |
| CAST | -1.038 | -0.102 |
| CCcont | -1.218 | 0.089 |
| DS01 | 0.801 | 0.741 |
| DS02 | -0.551 | 0.35 |
| DS04 | -0.579 | 0.208 |
| DS0c | -0.083 | 0.366 |
| GP01 | 0.249 | -0.157 |
| GP02 | 0.467 | 0.96 |
| GP0c | -1.414 | -0.812 |
| NOD | -0.918 | -0.475 |
| NZO | 0.962 | -0.259 |
| PWK | -0.247 | 0.226 |
| H37Rv_KO_CtpC | -0.561 | 0.274 |
| H37Rv_KO_CtpD | 0.854 | 0.389 |
| H37Rv_KO_Rv1272 | -0.475 | 0.012 |
| H37Rv_KO_SugABC | -1.867 | 0.579 |
| H37Rv_KO_MbtN | -0.019 | 0.555 |
| Trans05 | -1.731 | -1.041 |
| macrophage_unactivated | -0.991 | 0.331 |
| IL1 | -1.08 | -1.655 |
| Rapamycin | -2.311 | -1.301 |
| Tcell | 0.14 | -0.717 |
| GMCSF | -1.875 | -0.842 |
| IFNab | -0.414 | -0.762 |
| IFNg | -1.898 | -1.654 |
| IFNg_GMCSF1 | -1.144 | -0.496 |
| Rv1432_day32 | -0.038 | 0.832 |
| Rv1565c_day32 | -0.006 | 0.327 |
| secA2_input | -1.403 | -0.564 |
| delta_Rv3594 | 0.489 | 0.795 |
| delta_Rv3717 | 0.602 | 0.467 |
| delta_Rv3811 | 0.602 | 0.376 |
| delta_Rv0954 | 0.939 | -0.137 |
| PonA1 | 0.946 | 0.819 |
| EccD1_KO | 0.947 | 0.234 |
| EspI_KO | 0.63 | 0.0 |
| PE35_KO | 1.482 | 0.945 |
| PPE68_KO | 0.787 | 1.008 |
| glycerol2 | 0.331 | 0.122 |
| lignocerate | -0.472 | -0.441 |
| oleate | 0.893 | 0.481 |
| phosphatidylcholine | 0.549 | 0.115 |
| acetate | -1.453 | -0.712 |
| glucAc | -1.472 | 0.006 |
| Rv0950ko | -0.253 | 0.537 |
| Rv1096ko | 0.682 | 0.335 |
| Rv3684ko | 0.373 | 0.612 |
| delta_otsA_trehalose | -0.244 | 0.429 |