Top 10 genes with highest correlation to Rv0456A/mazF1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3163c/- | (cc=0.562) | info on Rv3163c/- |
| Rv0888/- | (cc=0.5245) | info on Rv0888/- |
| Rv3038c/- | (cc=0.4971) | info on Rv3038c/- |
| Rv0182c/sigG | (cc=0.4705) | info on Rv0182c/sigG |
| Rv2287/yjcE | (cc=0.4655) | info on Rv2287/yjcE |
| Rv1733c/- | (cc=0.4553) | info on Rv1733c/- |
| Rv0583c/lpqN | (cc=0.4476) | info on Rv0583c/lpqN |
| Rv1960c/parD1 | (cc=0.4465) | info on Rv1960c/parD1 |
| Rv2625c/- | (cc=0.4433) | info on Rv2625c/- |
| Rv2885c/- | (cc=0.4417) | info on Rv2885c/- |
Correlation of Rv0456A/mazF1 with Rv2625c/-
Normalized LFCs for Rv0456A/mazF1:
(description and provenance of datasets)
| Rv0456A/mazF1 | Rv2625c/- | |
| Fe_supp_jason_reseq | -1.814 | -0.996 |
| low_pH_jason_reseq | -0.56 | -0.502 |
| NO_jason_reseq | -0.609 | -0.373 |
| B6_jason_reseq | -0.231 | 1.067 |
| MHCII_jason_reseq | -0.245 | 0.747 |
| Isoniazid02 | -0.047 | 0.278 |
| Rifampicin4 | -0.051 | 0.165 |
| Ethambutol3 | -0.055 | -0.202 |
| Meropenem3 | -0.054 | 1.966 |
| Vancomycin16 | -0.066 | 0.395 |
| Rv2680_day32 | 1.591 | 0.49 |
| H37Rv_KO_MarP | 0.323 | -0.143 |
| hypoxia_3wks | -0.084 | 0.056 |
| hypoxia_6wks | -0.263 | -0.441 |
| glycerol | -0.654 | -0.424 |
| cholesterol | -1.105 | -0.105 |
| AJ | -0.182 | -0.151 |
| Bibs02 | 0.237 | -0.69 |
| Bibs02c | -0.185 | 0.026 |
| BL6 | 0.271 | -0.428 |
| BL6a | -0.518 | -0.09 |
| BXD01 | -0.128 | -0.335 |
| BXD010 | 0.166 | -1.187 |
| BXD011 | -0.669 | -0.931 |
| BXD03 | 0.738 | -0.707 |
| BXD04 | 0.249 | -0.857 |
| BXD05 | -0.06 | -0.241 |
| BXD06 | 0.077 | -0.591 |
| BXD07 | -0.062 | -0.6 |
| BXD08 | 0.143 | -0.551 |
| BXD09 | -0.34 | -0.48 |
| CAST | -1.038 | -0.073 |
| CCcont | -1.218 | -0.591 |
| DS01 | 0.801 | 0.103 |
| DS02 | -0.551 | -0.44 |
| DS04 | -0.579 | -0.483 |
| DS0c | -0.083 | 0.611 |
| GP01 | 0.249 | -0.025 |
| GP02 | 0.467 | -0.368 |
| GP0c | -1.414 | -1.287 |
| NOD | -0.918 | -0.524 |
| NZO | 0.962 | 0.038 |
| PWK | -0.247 | 0.29 |
| H37Rv_KO_CtpC | -0.561 | -1.229 |
| H37Rv_KO_CtpD | 0.854 | -1.174 |
| H37Rv_KO_Rv1272 | -0.475 | -1.443 |
| H37Rv_KO_SugABC | -1.867 | -1.392 |
| H37Rv_KO_MbtN | -0.019 | 0.43 |
| Trans05 | -1.731 | -0.89 |
| macrophage_unactivated | -0.991 | -0.581 |
| IL1 | -1.08 | -0.629 |
| Rapamycin | -2.311 | -0.97 |
| Tcell | 0.14 | -1.235 |
| GMCSF | -1.875 | -0.713 |
| IFNab | -0.414 | -1.445 |
| IFNg | -1.898 | -1.056 |
| IFNg_GMCSF1 | -1.144 | -1.782 |
| Rv1432_day32 | -0.038 | 0.763 |
| Rv1565c_day32 | -0.006 | -0.041 |
| secA2_input | -1.403 | -1.271 |
| delta_Rv3594 | 0.489 | 1.208 |
| delta_Rv3717 | 0.602 | 0.375 |
| delta_Rv3811 | 0.602 | 0.33 |
| delta_Rv0954 | 0.939 | 0.593 |
| PonA1 | 0.946 | 1.526 |
| EccD1_KO | 0.947 | 1.108 |
| EspI_KO | 0.63 | 0.0 |
| PE35_KO | 1.482 | 0.353 |
| PPE68_KO | 0.787 | 0.534 |
| glycerol2 | 0.331 | 0.261 |
| lignocerate | -0.472 | 0.357 |
| oleate | 0.893 | -0.026 |
| phosphatidylcholine | 0.549 | 0.216 |
| acetate | -1.453 | 1.393 |
| glucAc | -1.472 | 0.377 |
| Rv0950ko | -0.253 | 1.315 |
| Rv1096ko | 0.682 | 2.12 |
| Rv3684ko | 0.373 | 1.945 |
| delta_otsA_trehalose | -0.244 | -0.18 |