Top 10 genes with highest correlation to Rv0456A/mazF1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3163c/- | (cc=0.562) | info on Rv3163c/- |
| Rv0888/- | (cc=0.5245) | info on Rv0888/- |
| Rv3038c/- | (cc=0.4971) | info on Rv3038c/- |
| Rv0182c/sigG | (cc=0.4705) | info on Rv0182c/sigG |
| Rv2287/yjcE | (cc=0.4655) | info on Rv2287/yjcE |
| Rv1733c/- | (cc=0.4553) | info on Rv1733c/- |
| Rv0583c/lpqN | (cc=0.4476) | info on Rv0583c/lpqN |
| Rv1960c/parD1 | (cc=0.4465) | info on Rv1960c/parD1 |
| Rv2625c/- | (cc=0.4433) | info on Rv2625c/- |
| Rv2885c/- | (cc=0.4417) | info on Rv2885c/- |
Correlation of Rv0456A/mazF1 with Rv3038c/-
Normalized LFCs for Rv0456A/mazF1:
(description and provenance of datasets)
| Rv0456A/mazF1 | Rv3038c/- | |
| Fe_supp_jason_reseq | -1.814 | -0.923 |
| low_pH_jason_reseq | -0.56 | 0.694 |
| NO_jason_reseq | -0.609 | 1.712 |
| B6_jason_reseq | -0.231 | 1.289 |
| MHCII_jason_reseq | -0.245 | 1.357 |
| Isoniazid02 | -0.047 | 0.383 |
| Rifampicin4 | -0.051 | 0.374 |
| Ethambutol3 | -0.055 | 0.168 |
| Meropenem3 | -0.054 | 0.315 |
| Vancomycin16 | -0.066 | 0.698 |
| Rv2680_day32 | 1.591 | 0.0 |
| H37Rv_KO_MarP | 0.323 | 0.214 |
| hypoxia_3wks | -0.084 | 1.388 |
| hypoxia_6wks | -0.263 | 1.034 |
| glycerol | -0.654 | 1.69 |
| cholesterol | -1.105 | 0.703 |
| AJ | -0.182 | 1.126 |
| Bibs02 | 0.237 | 1.142 |
| Bibs02c | -0.185 | -0.564 |
| BL6 | 0.271 | -1.031 |
| BL6a | -0.518 | -0.416 |
| BXD01 | -0.128 | 0.593 |
| BXD010 | 0.166 | -1.056 |
| BXD011 | -0.669 | -0.602 |
| BXD03 | 0.738 | -1.115 |
| BXD04 | 0.249 | -0.333 |
| BXD05 | -0.06 | -0.065 |
| BXD06 | 0.077 | -0.535 |
| BXD07 | -0.062 | 0.0 |
| BXD08 | 0.143 | 0.899 |
| BXD09 | -0.34 | -1.018 |
| CAST | -1.038 | 0.0 |
| CCcont | -1.218 | -1.082 |
| DS01 | 0.801 | 1.283 |
| DS02 | -0.551 | 2.28 |
| DS04 | -0.579 | 0.822 |
| DS0c | -0.083 | 1.354 |
| GP01 | 0.249 | 0.387 |
| GP02 | 0.467 | 2.435 |
| GP0c | -1.414 | 0.173 |
| NOD | -0.918 | -0.605 |
| NZO | 0.962 | 0.348 |
| PWK | -0.247 | 0.419 |
| H37Rv_KO_CtpC | -0.561 | -0.249 |
| H37Rv_KO_CtpD | 0.854 | -0.061 |
| H37Rv_KO_Rv1272 | -0.475 | -0.775 |
| H37Rv_KO_SugABC | -1.867 | -0.718 |
| H37Rv_KO_MbtN | -0.019 | 0.137 |
| Trans05 | -1.731 | -1.077 |
| macrophage_unactivated | -0.991 | -0.338 |
| IL1 | -1.08 | -1.032 |
| Rapamycin | -2.311 | -1.488 |
| Tcell | 0.14 | -0.349 |
| GMCSF | -1.875 | -1.281 |
| IFNab | -0.414 | -1.466 |
| IFNg | -1.898 | -1.296 |
| IFNg_GMCSF1 | -1.144 | -1.093 |
| Rv1432_day32 | -0.038 | 0.799 |
| Rv1565c_day32 | -0.006 | 0.0 |
| secA2_input | -1.403 | -0.438 |
| delta_Rv3594 | 0.489 | 1.037 |
| delta_Rv3717 | 0.602 | 1.735 |
| delta_Rv3811 | 0.602 | 1.966 |
| delta_Rv0954 | 0.939 | 0.99 |
| PonA1 | 0.946 | 1.458 |
| EccD1_KO | 0.947 | 0.257 |
| EspI_KO | 0.63 | 0.0 |
| PE35_KO | 1.482 | 1.383 |
| PPE68_KO | 0.787 | 0.928 |
| glycerol2 | 0.331 | -0.263 |
| lignocerate | -0.472 | -0.983 |
| oleate | 0.893 | 0.61 |
| phosphatidylcholine | 0.549 | 0.0 |
| acetate | -1.453 | -1.814 |
| glucAc | -1.472 | -2.228 |
| Rv0950ko | -0.253 | 0.748 |
| Rv1096ko | 0.682 | 0.513 |
| Rv3684ko | 0.373 | -0.305 |
| delta_otsA_trehalose | -0.244 | 0.991 |