Top 10 genes with highest correlation to Rv0437c/psd:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0436c/pssA | (cc=0.7746) | info on Rv0436c/pssA |
| Rv1566c/- | (cc=0.6652) | info on Rv1566c/- |
| Rv1860/apa | (cc=0.6598) | info on Rv1860/apa |
| Rv3717/- | (cc=0.6433) | info on Rv3717/- |
| Rv1006/- | (cc=0.6121) | info on Rv1006/- |
| Rv2363/amiA2 | (cc=0.6097) | info on Rv2363/amiA2 |
| Rv0994/moeA1 | (cc=0.599) | info on Rv0994/moeA1 |
| Rv0999/- | (cc=0.5875) | info on Rv0999/- |
| Rv2869c/rip | (cc=0.5822) | info on Rv2869c/rip |
| Rv3139/fadE24 | (cc=0.5773) | info on Rv3139/fadE24 |
Correlation of Rv0437c/psd with Rv2869c/rip
Normalized LFCs for Rv0437c/psd:
(description and provenance of datasets)
| Rv0437c/psd | Rv2869c/rip | |
| Fe_supp_jason_reseq | 0.923 | 2.823 |
| low_pH_jason_reseq | 0.842 | -0.231 |
| NO_jason_reseq | -0.69 | -0.362 |
| B6_jason_reseq | -0.292 | -0.153 |
| MHCII_jason_reseq | -0.123 | -0.135 |
| Isoniazid02 | 1.106 | -0.361 |
| Rifampicin4 | -2.05 | -2.507 |
| Ethambutol3 | -1.327 | 0.482 |
| Meropenem3 | -2.165 | -0.528 |
| Vancomycin16 | -5.385 | -2.09 |
| Rv2680_day32 | -0.359 | -1.078 |
| H37Rv_KO_MarP | -1.926 | -4.082 |
| hypoxia_3wks | -0.885 | -2.504 |
| hypoxia_6wks | -1.013 | -1.599 |
| glycerol | 0.184 | 0.0 |
| cholesterol | 1.049 | 0.614 |
| AJ | 0.0 | 0.0 |
| Bibs02 | 0.0 | 0.0 |
| Bibs02c | 1.613 | 0.0 |
| BL6 | 0.0 | 0.0 |
| BL6a | 0.346 | 0.0 |
| BXD01 | -0.13 | 0.0 |
| BXD010 | -0.128 | 0.0 |
| BXD011 | 0.222 | 0.127 |
| BXD03 | -0.135 | 0.0 |
| BXD04 | -0.124 | 0.0 |
| BXD05 | -0.135 | 0.0 |
| BXD06 | -0.133 | 0.0 |
| BXD07 | -0.138 | 0.0 |
| BXD08 | -0.133 | 0.0 |
| BXD09 | -0.14 | 0.0 |
| CAST | -0.23 | 0.0 |
| CCcont | 2.54 | 2.313 |
| DS01 | 0.926 | 0.0 |
| DS02 | -0.217 | 0.0 |
| DS04 | 0.177 | 0.37 |
| DS0c | 0.0 | 0.0 |
| GP01 | 0.172 | 0.0 |
| GP02 | -0.083 | 0.0 |
| GP0c | 0.0 | 0.0 |
| NOD | -0.225 | 0.0 |
| NZO | -0.199 | 0.0 |
| PWK | -0.196 | 0.0 |
| H37Rv_KO_CtpC | 2.059 | 0.998 |
| H37Rv_KO_CtpD | 0.221 | 0.445 |
| H37Rv_KO_Rv1272 | 0.457 | 0.0 |
| H37Rv_KO_SugABC | 0.0 | 0.42 |
| H37Rv_KO_MbtN | 0.927 | 1.07 |
| Trans05 | -0.131 | 0.0 |
| macrophage_unactivated | -0.363 | 0.0 |
| IL1 | -0.715 | -0.374 |
| Rapamycin | 1.188 | 0.0 |
| Tcell | -1.235 | -0.411 |
| GMCSF | 0.283 | -0.333 |
| IFNab | 0.323 | 1.255 |
| IFNg | -1.013 | 0.593 |
| IFNg_GMCSF1 | -1.191 | -0.396 |
| Rv1432_day32 | -0.884 | -0.884 |
| Rv1565c_day32 | 0.924 | 0.0 |
| secA2_input | 0.371 | 2.826 |
| delta_Rv3594 | 0.506 | 0.783 |
| delta_Rv3717 | -1.723 | 0.824 |
| delta_Rv3811 | 0.134 | 0.376 |
| delta_Rv0954 | 1.647 | 1.569 |
| PonA1 | 0.829 | 0.069 |
| EccD1_KO | 0.855 | -0.549 |
| EspI_KO | 0.79 | -0.827 |
| PE35_KO | 1.482 | 0.435 |
| PPE68_KO | 1.245 | 0.912 |
| glycerol2 | 0.0 | -0.193 |
| lignocerate | 0.0 | -0.168 |
| oleate | 0.0 | -0.196 |
| phosphatidylcholine | 0.0 | -0.193 |
| acetate | 0.0 | 0.0 |
| glucAc | 0.0 | -0.143 |
| Rv0950ko | -0.899 | -1.538 |
| Rv1096ko | 0.546 | -0.703 |
| Rv3684ko | 0.062 | -0.943 |
| delta_otsA_trehalose | 0.04 | -0.041 |