Top 10 genes with highest correlation to Rv0437c/psd:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0436c/pssA | (cc=0.7746) | info on Rv0436c/pssA |
| Rv1566c/- | (cc=0.6652) | info on Rv1566c/- |
| Rv1860/apa | (cc=0.6598) | info on Rv1860/apa |
| Rv3717/- | (cc=0.6433) | info on Rv3717/- |
| Rv1006/- | (cc=0.6121) | info on Rv1006/- |
| Rv2363/amiA2 | (cc=0.6097) | info on Rv2363/amiA2 |
| Rv0994/moeA1 | (cc=0.599) | info on Rv0994/moeA1 |
| Rv0999/- | (cc=0.5875) | info on Rv0999/- |
| Rv2869c/rip | (cc=0.5822) | info on Rv2869c/rip |
| Rv3139/fadE24 | (cc=0.5773) | info on Rv3139/fadE24 |
Correlation of Rv0437c/psd with Rv0999/-
Normalized LFCs for Rv0437c/psd:
(description and provenance of datasets)
| Rv0437c/psd | Rv0999/- | |
| Fe_supp_jason_reseq | 0.923 | 1.07 |
| low_pH_jason_reseq | 0.842 | -2.859 |
| NO_jason_reseq | -0.69 | -0.79 |
| B6_jason_reseq | -0.292 | -0.668 |
| MHCII_jason_reseq | -0.123 | -0.177 |
| Isoniazid02 | 1.106 | -1.18 |
| Rifampicin4 | -2.05 | -6.0 |
| Ethambutol3 | -1.327 | -3.222 |
| Meropenem3 | -2.165 | -3.835 |
| Vancomycin16 | -5.385 | -6.0 |
| Rv2680_day32 | -0.359 | -0.811 |
| H37Rv_KO_MarP | -1.926 | -0.865 |
| hypoxia_3wks | -0.885 | 0.056 |
| hypoxia_6wks | -1.013 | -0.307 |
| glycerol | 0.184 | 0.398 |
| cholesterol | 1.049 | 2.859 |
| AJ | 0.0 | -0.871 |
| Bibs02 | 0.0 | 0.925 |
| Bibs02c | 1.613 | -0.083 |
| BL6 | 0.0 | -1.211 |
| BL6a | 0.346 | -1.322 |
| BXD01 | -0.13 | -0.918 |
| BXD010 | -0.128 | -1.239 |
| BXD011 | 0.222 | 1.126 |
| BXD03 | -0.135 | -0.489 |
| BXD04 | -0.124 | -0.673 |
| BXD05 | -0.135 | -0.396 |
| BXD06 | -0.133 | -0.748 |
| BXD07 | -0.138 | -0.58 |
| BXD08 | -0.133 | -0.659 |
| BXD09 | -0.14 | -0.395 |
| CAST | -0.23 | -1.957 |
| CCcont | 2.54 | 0.991 |
| DS01 | 0.926 | -0.546 |
| DS02 | -0.217 | 0.429 |
| DS04 | 0.177 | -0.266 |
| DS0c | 0.0 | -0.396 |
| GP01 | 0.172 | 0.574 |
| GP02 | -0.083 | 1.568 |
| GP0c | 0.0 | 0.445 |
| NOD | -0.225 | -0.975 |
| NZO | -0.199 | -1.608 |
| PWK | -0.196 | -0.602 |
| H37Rv_KO_CtpC | 2.059 | 0.918 |
| H37Rv_KO_CtpD | 0.221 | 1.633 |
| H37Rv_KO_Rv1272 | 0.457 | -0.146 |
| H37Rv_KO_SugABC | 0.0 | 1.311 |
| H37Rv_KO_MbtN | 0.927 | -0.317 |
| Trans05 | -0.131 | -0.733 |
| macrophage_unactivated | -0.363 | 0.458 |
| IL1 | -0.715 | 0.608 |
| Rapamycin | 1.188 | 1.903 |
| Tcell | -1.235 | -1.082 |
| GMCSF | 0.283 | 0.584 |
| IFNab | 0.323 | 1.224 |
| IFNg | -1.013 | 0.051 |
| IFNg_GMCSF1 | -1.191 | 0.845 |
| Rv1432_day32 | -0.884 | -1.785 |
| Rv1565c_day32 | 0.924 | -0.815 |
| secA2_input | 0.371 | -0.437 |
| delta_Rv3594 | 0.506 | 1.088 |
| delta_Rv3717 | -1.723 | 0.487 |
| delta_Rv3811 | 0.134 | 0.77 |
| delta_Rv0954 | 1.647 | 0.674 |
| PonA1 | 0.829 | 0.188 |
| EccD1_KO | 0.855 | -0.789 |
| EspI_KO | 0.79 | 0.1 |
| PE35_KO | 1.482 | 0.137 |
| PPE68_KO | 1.245 | 0.189 |
| glycerol2 | 0.0 | -0.747 |
| lignocerate | 0.0 | -2.208 |
| oleate | 0.0 | -0.855 |
| phosphatidylcholine | 0.0 | -1.288 |
| acetate | 0.0 | -0.497 |
| glucAc | 0.0 | -2.262 |
| Rv0950ko | -0.899 | -1.601 |
| Rv1096ko | 0.546 | -0.989 |
| Rv3684ko | 0.062 | -1.189 |
| delta_otsA_trehalose | 0.04 | -0.862 |