Top 10 genes with highest correlation to Rv0414c/thiE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3527/- | (cc=0.44) | info on Rv3527/- |
| Rv0427c/xthA | (cc=0.4275) | info on Rv0427c/xthA |
| Rv0553/menC | (cc=0.4155) | info on Rv0553/menC |
| Rv1711/- | (cc=0.4093) | info on Rv1711/- |
| Rv1717/- | (cc=0.4041) | info on Rv1717/- |
| Rv0581/vapB26 | (cc=0.3926) | info on Rv0581/vapB26 |
| Rv1982A/vapB36 | (cc=0.3816) | info on Rv1982A/vapB36 |
| Rv1149/- | (cc=0.3716) | info on Rv1149/- |
| Rv3039c/echA17 | (cc=0.3698) | info on Rv3039c/echA17 |
| Rv2494/vapC38 | (cc=0.3632) | info on Rv2494/vapC38 |
Correlation of Rv0414c/thiE with Rv1149/-
Normalized LFCs for Rv0414c/thiE:
(description and provenance of datasets)
| Rv0414c/thiE | Rv1149/- | |
| Fe_supp_jason_reseq | 0.923 | -1.566 |
| low_pH_jason_reseq | -0.811 | -1.532 |
| NO_jason_reseq | 0.0 | -0.37 |
| B6_jason_reseq | -0.538 | 0.532 |
| MHCII_jason_reseq | -0.105 | 0.553 |
| Isoniazid02 | 0.604 | 0.048 |
| Rifampicin4 | 1.362 | 1.235 |
| Ethambutol3 | 0.27 | 0.495 |
| Meropenem3 | 0.386 | 0.767 |
| Vancomycin16 | 0.0 | 0.499 |
| Rv2680_day32 | 0.0 | -0.613 |
| H37Rv_KO_MarP | 0.299 | 0.073 |
| hypoxia_3wks | -0.327 | 1.236 |
| hypoxia_6wks | 3.197 | 1.347 |
| glycerol | 1.147 | 0.255 |
| cholesterol | 1.577 | 0.146 |
| AJ | 1.239 | 0.813 |
| Bibs02 | -1.123 | 0.287 |
| Bibs02c | 1.801 | 1.363 |
| BL6 | 0.0 | -0.264 |
| BL6a | 2.197 | 0.913 |
| BXD01 | 0.334 | 0.281 |
| BXD010 | 1.256 | 0.804 |
| BXD011 | -0.157 | -0.142 |
| BXD03 | -0.258 | 0.807 |
| BXD04 | 0.317 | -0.546 |
| BXD05 | 1.67 | 0.505 |
| BXD06 | 0.713 | 0.326 |
| BXD07 | 0.355 | 0.399 |
| BXD08 | 0.614 | -0.707 |
| BXD09 | 0.798 | 0.493 |
| CAST | -0.606 | 0.232 |
| CCcont | -0.089 | -0.865 |
| DS01 | -0.45 | 0.743 |
| DS02 | -1.336 | 0.432 |
| DS04 | 2.867 | 0.195 |
| DS0c | -1.332 | 0.03 |
| GP01 | -0.607 | -2.51 |
| GP02 | -0.428 | -1.23 |
| GP0c | -0.799 | -0.676 |
| NOD | -0.428 | 1.751 |
| NZO | 0.512 | 0.0 |
| PWK | -0.666 | 0.895 |
| H37Rv_KO_CtpC | 0.81 | 3.594 |
| H37Rv_KO_CtpD | -0.651 | 1.213 |
| H37Rv_KO_Rv1272 | -0.598 | 0.01 |
| H37Rv_KO_SugABC | -0.608 | -1.653 |
| H37Rv_KO_MbtN | -0.061 | 0.607 |
| Trans05 | -0.672 | 0.951 |
| macrophage_unactivated | -1.644 | -0.432 |
| IL1 | 0.252 | 0.059 |
| Rapamycin | -0.276 | 0.092 |
| Tcell | -0.945 | 0.254 |
| GMCSF | 0.636 | 0.106 |
| IFNab | 0.381 | -0.184 |
| IFNg | 0.837 | -0.136 |
| IFNg_GMCSF1 | -1.26 | -0.063 |
| Rv1432_day32 | 0.0 | 0.658 |
| Rv1565c_day32 | 0.0 | 1.054 |
| secA2_input | -1.234 | 0.734 |
| delta_Rv3594 | 0.268 | 0.165 |
| delta_Rv3717 | -0.39 | 1.187 |
| delta_Rv3811 | 0.437 | 0.745 |
| delta_Rv0954 | -1.233 | 0.933 |
| PonA1 | -1.884 | -0.591 |
| EccD1_KO | 1.635 | 1.885 |
| EspI_KO | 2.199 | 1.6 |
| PE35_KO | 1.272 | 1.671 |
| PPE68_KO | 0.512 | 2.451 |
| glycerol2 | -1.073 | -0.719 |
| lignocerate | -0.613 | -0.865 |
| oleate | -1.086 | -0.293 |
| phosphatidylcholine | -1.073 | -0.629 |
| acetate | -1.044 | -0.547 |
| glucAc | 0.451 | -0.572 |
| Rv0950ko | 1.122 | 0.859 |
| Rv1096ko | 0.92 | 1.517 |
| Rv3684ko | 3.134 | 0.933 |
| delta_otsA_trehalose | 0.0 | -0.873 |