Top 10 genes with highest correlation to Rv0414c/thiE:
update plot | correlation | link to info on gene |
---|---|---|
Rv3527/- | (cc=0.44) | info on Rv3527/- |
Rv0427c/xthA | (cc=0.4275) | info on Rv0427c/xthA |
Rv0553/menC | (cc=0.4155) | info on Rv0553/menC |
Rv1711/- | (cc=0.4093) | info on Rv1711/- |
Rv1717/- | (cc=0.4041) | info on Rv1717/- |
Rv0581/vapB26 | (cc=0.3926) | info on Rv0581/vapB26 |
Rv1982A/vapB36 | (cc=0.3816) | info on Rv1982A/vapB36 |
Rv1149/- | (cc=0.3716) | info on Rv1149/- |
Rv3039c/echA17 | (cc=0.3698) | info on Rv3039c/echA17 |
Rv2494/vapC38 | (cc=0.3632) | info on Rv2494/vapC38 |
Correlation of Rv0414c/thiE with Rv3527/-
Normalized LFCs for Rv0414c/thiE:
(description and provenance of datasets)
Rv0414c/thiE | Rv3527/- | |
Fe_supp_jason_reseq | 0.923 | -0.24 |
low_pH_jason_reseq | -0.811 | -1.989 |
NO_jason_reseq | 0.0 | -1.352 |
B6_jason_reseq | -0.538 | -2.055 |
MHCII_jason_reseq | -0.105 | -1.933 |
Isoniazid02 | 0.604 | -0.239 |
Rifampicin4 | 1.362 | 0.812 |
Ethambutol3 | 0.27 | 0.275 |
Meropenem3 | 0.386 | 0.423 |
Vancomycin16 | 0.0 | 0.745 |
Rv2680_day32 | 0.0 | 1.206 |
H37Rv_KO_MarP | 0.299 | -0.693 |
hypoxia_3wks | -0.327 | -0.494 |
hypoxia_6wks | 3.197 | -0.319 |
glycerol | 1.147 | 0.505 |
cholesterol | 1.577 | -1.583 |
AJ | 1.239 | 0.249 |
Bibs02 | -1.123 | -0.909 |
Bibs02c | 1.801 | 1.805 |
BL6 | 0.0 | -0.231 |
BL6a | 2.197 | 2.069 |
BXD01 | 0.334 | -0.455 |
BXD010 | 1.256 | 0.306 |
BXD011 | -0.157 | 1.804 |
BXD03 | -0.258 | 1.376 |
BXD04 | 0.317 | 0.796 |
BXD05 | 1.67 | 0.306 |
BXD06 | 0.713 | 0.377 |
BXD07 | 0.355 | 1.06 |
BXD08 | 0.614 | 0.551 |
BXD09 | 0.798 | 1.178 |
CAST | -0.606 | 0.277 |
CCcont | -0.089 | -0.109 |
DS01 | -0.45 | 0.033 |
DS02 | -1.336 | -0.032 |
DS04 | 2.867 | 1.525 |
DS0c | -1.332 | 0.204 |
GP01 | -0.607 | -1.967 |
GP02 | -0.428 | -1.658 |
GP0c | -0.799 | -2.081 |
NOD | -0.428 | 0.866 |
NZO | 0.512 | 0.883 |
PWK | -0.666 | -0.465 |
H37Rv_KO_CtpC | 0.81 | 0.97 |
H37Rv_KO_CtpD | -0.651 | 0.303 |
H37Rv_KO_Rv1272 | -0.598 | -0.285 |
H37Rv_KO_SugABC | -0.608 | -1.355 |
H37Rv_KO_MbtN | -0.061 | -1.41 |
Trans05 | -0.672 | -0.841 |
macrophage_unactivated | -1.644 | -0.054 |
IL1 | 0.252 | -0.178 |
Rapamycin | -0.276 | 0.859 |
Tcell | -0.945 | 0.081 |
GMCSF | 0.636 | -0.203 |
IFNab | 0.381 | 0.886 |
IFNg | 0.837 | 0.131 |
IFNg_GMCSF1 | -1.26 | 0.518 |
Rv1432_day32 | 0.0 | -0.356 |
Rv1565c_day32 | 0.0 | -1.579 |
secA2_input | -1.234 | -1.293 |
delta_Rv3594 | 0.268 | -2.424 |
delta_Rv3717 | -0.39 | -0.856 |
delta_Rv3811 | 0.437 | -3.15 |
delta_Rv0954 | -1.233 | -2.507 |
PonA1 | -1.884 | -1.009 |
EccD1_KO | 1.635 | -0.299 |
EspI_KO | 2.199 | 1.691 |
PE35_KO | 1.272 | 0.181 |
PPE68_KO | 0.512 | -0.042 |
glycerol2 | -1.073 | -1.871 |
lignocerate | -0.613 | -1.626 |
oleate | -1.086 | -1.095 |
phosphatidylcholine | -1.073 | -2.451 |
acetate | -1.044 | -1.006 |
glucAc | 0.451 | -1.764 |
Rv0950ko | 1.122 | 0.82 |
Rv1096ko | 0.92 | -0.124 |
Rv3684ko | 3.134 | 0.586 |
delta_otsA_trehalose | 0.0 | 0.722 |