Top 10 genes with highest correlation to Rv0408/pta:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0994/moeA1 | (cc=0.453) | info on Rv0994/moeA1 |
| Rv0036c/- | (cc=0.4499) | info on Rv0036c/- |
| Rv2053c/fxsA | (cc=0.4364) | info on Rv2053c/fxsA |
| Rv1109c/- | (cc=0.4315) | info on Rv1109c/- |
| Rv3041c/- | (cc=0.4279) | info on Rv3041c/- |
| Rv2362c/recO | (cc=0.4247) | info on Rv2362c/recO |
| Rv1280c/oppA | (cc=0.4181) | info on Rv1280c/oppA |
| Rv3132c/devS | (cc=0.4168) | info on Rv3132c/devS |
| Rv2734/- | (cc=0.4117) | info on Rv2734/- |
| Rv3005c/- | (cc=0.408) | info on Rv3005c/- |
Correlation of Rv0408/pta with Rv0994/moeA1
Normalized LFCs for Rv0408/pta:
(description and provenance of datasets)
| Rv0408/pta | Rv0994/moeA1 | |
| Fe_supp_jason_reseq | 0.276 | -0.559 |
| low_pH_jason_reseq | -0.883 | -4.603 |
| NO_jason_reseq | 0.294 | -2.371 |
| B6_jason_reseq | 0.026 | -3.282 |
| MHCII_jason_reseq | -0.221 | -1.968 |
| Isoniazid02 | -0.081 | 1.762 |
| Rifampicin4 | -0.761 | -6.0 |
| Ethambutol3 | -0.068 | -0.683 |
| Meropenem3 | 0.588 | -3.435 |
| Vancomycin16 | -0.098 | -6.0 |
| Rv2680_day32 | -0.238 | -2.48 |
| H37Rv_KO_MarP | 0.087 | -4.936 |
| hypoxia_3wks | -0.399 | -3.537 |
| hypoxia_6wks | -1.8 | -4.475 |
| glycerol | 1.066 | 0.635 |
| cholesterol | 0.54 | 2.24 |
| AJ | -1.239 | -3.387 |
| Bibs02 | 0.081 | 0.701 |
| Bibs02c | 0.121 | 0.771 |
| BL6 | -0.246 | -1.158 |
| BL6a | 0.143 | -1.995 |
| BXD01 | -0.601 | -2.963 |
| BXD010 | -0.478 | -2.049 |
| BXD011 | 0.11 | -2.485 |
| BXD03 | -0.126 | -2.38 |
| BXD04 | 0.156 | -2.412 |
| BXD05 | -0.041 | -2.625 |
| BXD06 | 0.319 | -1.272 |
| BXD07 | -0.152 | -3.024 |
| BXD08 | -0.524 | -2.42 |
| BXD09 | -0.064 | -2.741 |
| CAST | -0.716 | -3.684 |
| CCcont | -0.045 | 0.079 |
| DS01 | 0.171 | 0.587 |
| DS02 | 0.545 | 0.665 |
| DS04 | -0.03 | -0.245 |
| DS0c | -0.066 | 0.024 |
| GP01 | 0.293 | -1.998 |
| GP02 | 0.668 | -1.817 |
| GP0c | 0.232 | -2.631 |
| NOD | -0.936 | -2.262 |
| NZO | -1.568 | -3.891 |
| PWK | -0.183 | -3.342 |
| H37Rv_KO_CtpC | 0.329 | -0.437 |
| H37Rv_KO_CtpD | 0.982 | 0.612 |
| H37Rv_KO_Rv1272 | -0.495 | -2.656 |
| H37Rv_KO_SugABC | 0.283 | -1.744 |
| H37Rv_KO_MbtN | 0.426 | -0.399 |
| Trans05 | -0.188 | -1.797 |
| macrophage_unactivated | -0.442 | -0.303 |
| IL1 | -0.225 | -1.186 |
| Rapamycin | -0.046 | -0.779 |
| Tcell | -0.098 | -1.404 |
| GMCSF | -0.161 | -0.895 |
| IFNab | 0.175 | -0.218 |
| IFNg | 0.118 | -2.205 |
| IFNg_GMCSF1 | -0.99 | -2.341 |
| Rv1432_day32 | -0.849 | -3.139 |
| Rv1565c_day32 | 0.028 | -2.019 |
| secA2_input | 0.388 | 0.374 |
| delta_Rv3594 | 0.124 | -1.366 |
| delta_Rv3717 | -0.081 | -0.999 |
| delta_Rv3811 | 0.29 | -0.674 |
| delta_Rv0954 | -0.027 | -0.508 |
| PonA1 | 0.617 | -0.454 |
| EccD1_KO | 0.148 | 0.776 |
| EspI_KO | -0.362 | 0.436 |
| PE35_KO | 0.461 | 0.977 |
| PPE68_KO | 0.419 | 0.79 |
| glycerol2 | -0.317 | 0.914 |
| lignocerate | -0.746 | -0.424 |
| oleate | 0.078 | -0.315 |
| phosphatidylcholine | -0.331 | -0.679 |
| acetate | -1.19 | -0.178 |
| glucAc | -1.681 | -0.229 |
| Rv0950ko | 0.247 | 0.377 |
| Rv1096ko | 0.7 | 0.666 |
| Rv3684ko | 0.472 | -0.144 |
| delta_otsA_trehalose | 0.622 | 0.368 |