Top 10 genes with highest correlation to Rv0397A/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2430c/PPE41 | (cc=0.6558) | info on Rv2430c/PPE41 |
| Rv3218/- | (cc=0.6131) | info on Rv3218/- |
| Rv3694c/- | (cc=0.603) | info on Rv3694c/- |
| Rv1551/plsB1 | (cc=0.6019) | info on Rv1551/plsB1 |
| Rv1662/pks8 | (cc=0.5834) | info on Rv1662/pks8 |
| Rv0231/fadE4 | (cc=0.5773) | info on Rv0231/fadE4 |
| Rv3567c/hsaB | (cc=0.576) | info on Rv3567c/hsaB |
| Rv2777c/- | (cc=0.5711) | info on Rv2777c/- |
| Rv3116/moeB2 | (cc=0.5679) | info on Rv3116/moeB2 |
| Rv1504c/- | (cc=0.5661) | info on Rv1504c/- |
Correlation of Rv0397A/- with Rv3116/moeB2
Normalized LFCs for Rv0397A/-:
(description and provenance of datasets)
| Rv0397A/- | Rv3116/moeB2 | |
| Fe_supp_jason_reseq | 0.655 | 0.753 |
| low_pH_jason_reseq | -2.044 | -0.539 |
| NO_jason_reseq | 0.108 | -0.483 |
| B6_jason_reseq | -1.253 | 0.435 |
| MHCII_jason_reseq | -0.813 | 0.474 |
| Isoniazid02 | -2.242 | -1.141 |
| Rifampicin4 | -2.071 | -0.051 |
| Ethambutol3 | -1.31 | -0.544 |
| Meropenem3 | -1.388 | -1.06 |
| Vancomycin16 | -1.464 | -0.332 |
| Rv2680_day32 | -2.129 | -0.749 |
| H37Rv_KO_MarP | 0.557 | -0.322 |
| hypoxia_3wks | 0.371 | 0.279 |
| hypoxia_6wks | -0.209 | -0.184 |
| glycerol | -0.837 | -0.707 |
| cholesterol | -1.69 | -0.491 |
| AJ | 0.514 | -0.235 |
| Bibs02 | -0.034 | -0.445 |
| Bibs02c | -1.052 | 0.099 |
| BL6 | 0.714 | 0.681 |
| BL6a | 0.696 | 0.763 |
| BXD01 | 1.016 | 0.64 |
| BXD010 | 1.88 | 0.848 |
| BXD011 | 2.276 | 1.007 |
| BXD03 | 1.3 | 0.782 |
| BXD04 | 1.568 | 0.983 |
| BXD05 | 0.473 | 1.152 |
| BXD06 | 1.729 | 0.642 |
| BXD07 | 1.667 | 0.666 |
| BXD08 | 0.335 | 0.673 |
| BXD09 | 1.569 | 0.712 |
| CAST | -1.23 | -0.057 |
| CCcont | 1.256 | 0.584 |
| DS01 | 0.132 | 0.435 |
| DS02 | 1.404 | 0.777 |
| DS04 | -1.098 | 0.555 |
| DS0c | 0.933 | 0.383 |
| GP01 | 1.24 | 0.277 |
| GP02 | 1.347 | 0.652 |
| GP0c | -0.157 | 0.307 |
| NOD | -0.867 | -0.111 |
| NZO | -1.263 | -0.256 |
| PWK | 1.346 | -0.287 |
| H37Rv_KO_CtpC | 1.657 | 0.608 |
| H37Rv_KO_CtpD | -1.275 | 0.987 |
| H37Rv_KO_Rv1272 | 2.524 | 0.52 |
| H37Rv_KO_SugABC | 0.293 | 0.234 |
| H37Rv_KO_MbtN | 1.94 | 0.791 |
| Trans05 | 1.93 | 0.687 |
| macrophage_unactivated | 0.477 | 0.275 |
| IL1 | 0.303 | -0.133 |
| Rapamycin | 0.908 | -0.356 |
| Tcell | -0.036 | 0.094 |
| GMCSF | 1.13 | 0.391 |
| IFNab | 0.762 | -0.16 |
| IFNg | -0.516 | -0.374 |
| IFNg_GMCSF1 | 0.321 | 0.091 |
| Rv1432_day32 | -0.107 | -0.168 |
| Rv1565c_day32 | 0.144 | -0.158 |
| secA2_input | 0.803 | -0.704 |
| delta_Rv3594 | -1.025 | 0.265 |
| delta_Rv3717 | -1.007 | 0.036 |
| delta_Rv3811 | -0.329 | -0.18 |
| delta_Rv0954 | -1.194 | 0.224 |
| PonA1 | -0.792 | 0.066 |
| EccD1_KO | -1.108 | -0.22 |
| EspI_KO | -0.106 | -0.026 |
| PE35_KO | -0.143 | -0.222 |
| PPE68_KO | -0.486 | -0.029 |
| glycerol2 | -0.311 | 0.252 |
| lignocerate | -1.053 | -0.142 |
| oleate | 0.133 | 0.885 |
| phosphatidylcholine | -0.276 | 0.293 |
| acetate | -0.349 | -0.61 |
| glucAc | -0.937 | -1.047 |
| Rv0950ko | 0.286 | -0.072 |
| Rv1096ko | 0.247 | -0.977 |
| Rv3684ko | 0.092 | -0.603 |
| delta_otsA_trehalose | 0.564 | -0.223 |