Top 10 genes with highest correlation to Rv0397A/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2430c/PPE41 | (cc=0.6558) | info on Rv2430c/PPE41 |
| Rv3218/- | (cc=0.6131) | info on Rv3218/- |
| Rv3694c/- | (cc=0.603) | info on Rv3694c/- |
| Rv1551/plsB1 | (cc=0.6019) | info on Rv1551/plsB1 |
| Rv1662/pks8 | (cc=0.5834) | info on Rv1662/pks8 |
| Rv0231/fadE4 | (cc=0.5773) | info on Rv0231/fadE4 |
| Rv3567c/hsaB | (cc=0.576) | info on Rv3567c/hsaB |
| Rv2777c/- | (cc=0.5711) | info on Rv2777c/- |
| Rv3116/moeB2 | (cc=0.5679) | info on Rv3116/moeB2 |
| Rv1504c/- | (cc=0.5661) | info on Rv1504c/- |
Correlation of Rv0397A/- with Rv2430c/PPE41
Normalized LFCs for Rv0397A/-:
(description and provenance of datasets)
| Rv0397A/- | Rv2430c/PPE41 | |
| Fe_supp_jason_reseq | 0.655 | -0.259 |
| low_pH_jason_reseq | -2.044 | -0.617 |
| NO_jason_reseq | 0.108 | -0.326 |
| B6_jason_reseq | -1.253 | -0.565 |
| MHCII_jason_reseq | -0.813 | -1.222 |
| Isoniazid02 | -2.242 | -0.362 |
| Rifampicin4 | -2.071 | -0.379 |
| Ethambutol3 | -1.31 | -0.539 |
| Meropenem3 | -1.388 | 0.604 |
| Vancomycin16 | -1.464 | -0.541 |
| Rv2680_day32 | -2.129 | -0.546 |
| H37Rv_KO_MarP | 0.557 | 0.78 |
| hypoxia_3wks | 0.371 | -0.016 |
| hypoxia_6wks | -0.209 | -0.558 |
| glycerol | -0.837 | -1.482 |
| cholesterol | -1.69 | -0.355 |
| AJ | 0.514 | 1.329 |
| Bibs02 | -0.034 | 0.293 |
| Bibs02c | -1.052 | -0.441 |
| BL6 | 0.714 | 2.014 |
| BL6a | 0.696 | 1.624 |
| BXD01 | 1.016 | 1.73 |
| BXD010 | 1.88 | 2.268 |
| BXD011 | 2.276 | 2.003 |
| BXD03 | 1.3 | 2.085 |
| BXD04 | 1.568 | 2.116 |
| BXD05 | 0.473 | 2.269 |
| BXD06 | 1.729 | 1.836 |
| BXD07 | 1.667 | 1.829 |
| BXD08 | 0.335 | 1.59 |
| BXD09 | 1.569 | 1.891 |
| CAST | -1.23 | 1.024 |
| CCcont | 1.256 | 1.659 |
| DS01 | 0.132 | 1.092 |
| DS02 | 1.404 | 0.558 |
| DS04 | -1.098 | 0.769 |
| DS0c | 0.933 | 0.509 |
| GP01 | 1.24 | 0.134 |
| GP02 | 1.347 | 2.462 |
| GP0c | -0.157 | 0.343 |
| NOD | -0.867 | 1.447 |
| NZO | -1.263 | 0.483 |
| PWK | 1.346 | 0.872 |
| H37Rv_KO_CtpC | 1.657 | 0.914 |
| H37Rv_KO_CtpD | -1.275 | 1.252 |
| H37Rv_KO_Rv1272 | 2.524 | 1.399 |
| H37Rv_KO_SugABC | 0.293 | 1.91 |
| H37Rv_KO_MbtN | 1.94 | 1.129 |
| Trans05 | 1.93 | 2.226 |
| macrophage_unactivated | 0.477 | 1.076 |
| IL1 | 0.303 | 0.125 |
| Rapamycin | 0.908 | 0.19 |
| Tcell | -0.036 | 0.094 |
| GMCSF | 1.13 | 0.636 |
| IFNab | 0.762 | 0.308 |
| IFNg | -0.516 | 0.537 |
| IFNg_GMCSF1 | 0.321 | 0.688 |
| Rv1432_day32 | -0.107 | -0.428 |
| Rv1565c_day32 | 0.144 | 0.782 |
| secA2_input | 0.803 | -0.891 |
| delta_Rv3594 | -1.025 | -0.571 |
| delta_Rv3717 | -1.007 | -1.178 |
| delta_Rv3811 | -0.329 | -0.265 |
| delta_Rv0954 | -1.194 | -1.172 |
| PonA1 | -0.792 | -0.066 |
| EccD1_KO | -1.108 | -0.625 |
| EspI_KO | -0.106 | -0.331 |
| PE35_KO | -0.143 | -0.726 |
| PPE68_KO | -0.486 | -0.701 |
| glycerol2 | -0.311 | -0.084 |
| lignocerate | -1.053 | -0.073 |
| oleate | 0.133 | 0.234 |
| phosphatidylcholine | -0.276 | 0.041 |
| acetate | -0.349 | 0.017 |
| glucAc | -0.937 | -0.627 |
| Rv0950ko | 0.286 | -0.136 |
| Rv1096ko | 0.247 | -0.22 |
| Rv3684ko | 0.092 | -0.508 |
| delta_otsA_trehalose | 0.564 | 1.428 |