Top 10 genes with highest correlation to Rv0395/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2290/lppO | (cc=0.4786) | info on Rv2290/lppO |
| Rv0233/nrdB | (cc=0.4725) | info on Rv0233/nrdB |
| Rv3714c/- | (cc=0.469) | info on Rv3714c/- |
| Rv0817c/- | (cc=0.4621) | info on Rv0817c/- |
| Rv2994/- | (cc=0.4579) | info on Rv2994/- |
| Rv0526/- | (cc=0.4498) | info on Rv0526/- |
| Rv0885/- | (cc=0.4489) | info on Rv0885/- |
| Rv0677c/mmpS5 | (cc=0.4464) | info on Rv0677c/mmpS5 |
| Rv3248c/sahH | (cc=0.4456) | info on Rv3248c/sahH |
| Rv0889c/citA | (cc=0.4421) | info on Rv0889c/citA |
Correlation of Rv0395/- with Rv0889c/citA
Normalized LFCs for Rv0395/-:
(description and provenance of datasets)
| Rv0395/- | Rv0889c/citA | |
| Fe_supp_jason_reseq | -0.63 | 0.339 |
| low_pH_jason_reseq | 0.81 | -1.427 |
| NO_jason_reseq | 0.326 | -0.234 |
| B6_jason_reseq | 0.944 | -0.039 |
| MHCII_jason_reseq | 1.404 | 0.549 |
| Isoniazid02 | -0.051 | -0.351 |
| Rifampicin4 | -0.555 | 0.839 |
| Ethambutol3 | -0.855 | 0.353 |
| Meropenem3 | 0.455 | 1.433 |
| Vancomycin16 | -0.414 | 0.631 |
| Rv2680_day32 | 0.366 | -0.465 |
| H37Rv_KO_MarP | 0.246 | -0.502 |
| hypoxia_3wks | 1.009 | -0.478 |
| hypoxia_6wks | 0.121 | -0.543 |
| glycerol | -2.722 | 0.015 |
| cholesterol | -1.903 | -1.504 |
| AJ | 0.119 | -0.229 |
| Bibs02 | 0.559 | 0.072 |
| Bibs02c | 0.691 | -0.165 |
| BL6 | 0.121 | -0.597 |
| BL6a | 0.276 | -1.211 |
| BXD01 | 0.301 | -1.185 |
| BXD010 | -0.734 | -1.154 |
| BXD011 | 0.0 | -1.348 |
| BXD03 | 0.082 | -0.775 |
| BXD04 | -1.06 | -1.597 |
| BXD05 | -0.053 | -1.521 |
| BXD06 | 0.158 | -1.083 |
| BXD07 | -0.412 | -1.296 |
| BXD08 | -0.032 | -1.154 |
| BXD09 | -0.171 | -1.53 |
| CAST | -0.067 | -0.32 |
| CCcont | -0.856 | -0.739 |
| DS01 | -0.034 | -0.378 |
| DS02 | 0.274 | -0.621 |
| DS04 | 0.457 | 0.049 |
| DS0c | -1.037 | -0.365 |
| GP01 | -1.749 | -0.422 |
| GP02 | 0.091 | -0.316 |
| GP0c | -1.158 | -1.483 |
| NOD | 0.622 | 0.838 |
| NZO | 0.192 | -0.088 |
| PWK | 0.198 | 0.641 |
| H37Rv_KO_CtpC | -0.155 | -0.322 |
| H37Rv_KO_CtpD | -1.412 | 0.058 |
| H37Rv_KO_Rv1272 | -1.496 | -2.393 |
| H37Rv_KO_SugABC | -0.387 | -0.184 |
| H37Rv_KO_MbtN | -2.332 | -2.003 |
| Trans05 | 0.436 | -1.2 |
| macrophage_unactivated | -0.341 | -0.877 |
| IL1 | 0.225 | -0.955 |
| Rapamycin | -1.353 | -0.853 |
| Tcell | 0.192 | 0.257 |
| GMCSF | -0.092 | -1.225 |
| IFNab | -0.647 | -1.076 |
| IFNg | 0.203 | -0.599 |
| IFNg_GMCSF1 | -0.427 | -0.54 |
| Rv1432_day32 | 2.241 | 0.202 |
| Rv1565c_day32 | 0.49 | 0.043 |
| secA2_input | 0.831 | 0.02 |
| delta_Rv3594 | 1.152 | -0.298 |
| delta_Rv3717 | 0.415 | -0.395 |
| delta_Rv3811 | 0.232 | -0.207 |
| delta_Rv0954 | 1.644 | 0.952 |
| PonA1 | 0.201 | 0.604 |
| EccD1_KO | 0.898 | -0.401 |
| EspI_KO | -0.83 | 0.896 |
| PE35_KO | -0.038 | 0.729 |
| PPE68_KO | 0.08 | 1.005 |
| glycerol2 | -1.607 | -1.939 |
| lignocerate | -1.677 | -1.405 |
| oleate | -1.007 | -1.697 |
| phosphatidylcholine | -1.542 | -1.606 |
| acetate | -3.157 | -1.559 |
| glucAc | -1.405 | -0.884 |
| Rv0950ko | -0.133 | -0.495 |
| Rv1096ko | 0.691 | -0.277 |
| Rv3684ko | -0.557 | -0.537 |
| delta_otsA_trehalose | -0.286 | -0.523 |