Top 10 genes with highest correlation to Rv0395/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2290/lppO | (cc=0.4786) | info on Rv2290/lppO |
| Rv0233/nrdB | (cc=0.4725) | info on Rv0233/nrdB |
| Rv3714c/- | (cc=0.469) | info on Rv3714c/- |
| Rv0817c/- | (cc=0.4621) | info on Rv0817c/- |
| Rv2994/- | (cc=0.4579) | info on Rv2994/- |
| Rv0526/- | (cc=0.4498) | info on Rv0526/- |
| Rv0885/- | (cc=0.4489) | info on Rv0885/- |
| Rv0677c/mmpS5 | (cc=0.4464) | info on Rv0677c/mmpS5 |
| Rv3248c/sahH | (cc=0.4456) | info on Rv3248c/sahH |
| Rv0889c/citA | (cc=0.4421) | info on Rv0889c/citA |
Correlation of Rv0395/- with Rv0233/nrdB
Normalized LFCs for Rv0395/-:
(description and provenance of datasets)
| Rv0395/- | Rv0233/nrdB | |
| Fe_supp_jason_reseq | -0.63 | 0.2 |
| low_pH_jason_reseq | 0.81 | -0.095 |
| NO_jason_reseq | 0.326 | -0.131 |
| B6_jason_reseq | 0.944 | 0.854 |
| MHCII_jason_reseq | 1.404 | 1.421 |
| Isoniazid02 | -0.051 | 0.322 |
| Rifampicin4 | -0.555 | -0.192 |
| Ethambutol3 | -0.855 | 0.154 |
| Meropenem3 | 0.455 | 0.291 |
| Vancomycin16 | -0.414 | -0.443 |
| Rv2680_day32 | 0.366 | 0.614 |
| H37Rv_KO_MarP | 0.246 | 0.167 |
| hypoxia_3wks | 1.009 | -0.159 |
| hypoxia_6wks | 0.121 | 0.192 |
| glycerol | -2.722 | -0.973 |
| cholesterol | -1.903 | -0.39 |
| AJ | 0.119 | 0.316 |
| Bibs02 | 0.559 | 0.891 |
| Bibs02c | 0.691 | 0.543 |
| BL6 | 0.121 | -1.416 |
| BL6a | 0.276 | -0.575 |
| BXD01 | 0.301 | -0.696 |
| BXD010 | -0.734 | -0.537 |
| BXD011 | 0.0 | -0.693 |
| BXD03 | 0.082 | -1.509 |
| BXD04 | -1.06 | -0.539 |
| BXD05 | -0.053 | -0.41 |
| BXD06 | 0.158 | -0.887 |
| BXD07 | -0.412 | -1.157 |
| BXD08 | -0.032 | -0.354 |
| BXD09 | -0.171 | -0.919 |
| CAST | -0.067 | -0.038 |
| CCcont | -0.856 | -1.564 |
| DS01 | -0.034 | 1.025 |
| DS02 | 0.274 | 0.748 |
| DS04 | 0.457 | 0.933 |
| DS0c | -1.037 | 0.548 |
| GP01 | -1.749 | -0.911 |
| GP02 | 0.091 | -0.359 |
| GP0c | -1.158 | -0.382 |
| NOD | 0.622 | 0.605 |
| NZO | 0.192 | 0.12 |
| PWK | 0.198 | -0.242 |
| H37Rv_KO_CtpC | -0.155 | -1.19 |
| H37Rv_KO_CtpD | -1.412 | -0.803 |
| H37Rv_KO_Rv1272 | -1.496 | -0.626 |
| H37Rv_KO_SugABC | -0.387 | -0.316 |
| H37Rv_KO_MbtN | -2.332 | -0.755 |
| Trans05 | 0.436 | -0.13 |
| macrophage_unactivated | -0.341 | -1.083 |
| IL1 | 0.225 | -0.193 |
| Rapamycin | -1.353 | -0.786 |
| Tcell | 0.192 | -0.046 |
| GMCSF | -0.092 | 0.459 |
| IFNab | -0.647 | -0.478 |
| IFNg | 0.203 | 0.38 |
| IFNg_GMCSF1 | -0.427 | -0.396 |
| Rv1432_day32 | 2.241 | 0.042 |
| Rv1565c_day32 | 0.49 | 0.963 |
| secA2_input | 0.831 | 0.106 |
| delta_Rv3594 | 1.152 | -0.399 |
| delta_Rv3717 | 0.415 | -0.766 |
| delta_Rv3811 | 0.232 | -0.589 |
| delta_Rv0954 | 1.644 | -0.252 |
| PonA1 | 0.201 | -0.066 |
| EccD1_KO | 0.898 | -0.286 |
| EspI_KO | -0.83 | -0.368 |
| PE35_KO | -0.038 | -1.041 |
| PPE68_KO | 0.08 | -0.483 |
| glycerol2 | -1.607 | -0.911 |
| lignocerate | -1.677 | -0.609 |
| oleate | -1.007 | -0.404 |
| phosphatidylcholine | -1.542 | -0.598 |
| acetate | -3.157 | -1.107 |
| glucAc | -1.405 | -1.029 |
| Rv0950ko | -0.133 | 0.308 |
| Rv1096ko | 0.691 | 0.805 |
| Rv3684ko | -0.557 | 0.259 |
| delta_otsA_trehalose | -0.286 | 0.437 |