Top 10 genes with highest correlation to Rv0395/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2290/lppO | (cc=0.4786) | info on Rv2290/lppO |
| Rv0233/nrdB | (cc=0.4725) | info on Rv0233/nrdB |
| Rv3714c/- | (cc=0.469) | info on Rv3714c/- |
| Rv0817c/- | (cc=0.4621) | info on Rv0817c/- |
| Rv2994/- | (cc=0.4579) | info on Rv2994/- |
| Rv0526/- | (cc=0.4498) | info on Rv0526/- |
| Rv0885/- | (cc=0.4489) | info on Rv0885/- |
| Rv0677c/mmpS5 | (cc=0.4464) | info on Rv0677c/mmpS5 |
| Rv3248c/sahH | (cc=0.4456) | info on Rv3248c/sahH |
| Rv0889c/citA | (cc=0.4421) | info on Rv0889c/citA |
Correlation of Rv0395/- with Rv0817c/-
Normalized LFCs for Rv0395/-:
(description and provenance of datasets)
| Rv0395/- | Rv0817c/- | |
| Fe_supp_jason_reseq | -0.63 | -1.397 |
| low_pH_jason_reseq | 0.81 | -0.156 |
| NO_jason_reseq | 0.326 | 0.969 |
| B6_jason_reseq | 0.944 | -1.11 |
| MHCII_jason_reseq | 1.404 | -0.71 |
| Isoniazid02 | -0.051 | 0.528 |
| Rifampicin4 | -0.555 | -0.29 |
| Ethambutol3 | -0.855 | 0.235 |
| Meropenem3 | 0.455 | -0.266 |
| Vancomycin16 | -0.414 | 0.0 |
| Rv2680_day32 | 0.366 | 0.235 |
| H37Rv_KO_MarP | 0.246 | -0.2 |
| hypoxia_3wks | 1.009 | 1.655 |
| hypoxia_6wks | 0.121 | 0.633 |
| glycerol | -2.722 | -0.459 |
| cholesterol | -1.903 | -1.507 |
| AJ | 0.119 | -0.805 |
| Bibs02 | 0.559 | -0.522 |
| Bibs02c | 0.691 | -0.537 |
| BL6 | 0.121 | -1.995 |
| BL6a | 0.276 | -1.263 |
| BXD01 | 0.301 | -0.582 |
| BXD010 | -0.734 | -1.115 |
| BXD011 | 0.0 | -0.71 |
| BXD03 | 0.082 | -1.177 |
| BXD04 | -1.06 | -0.896 |
| BXD05 | -0.053 | -0.802 |
| BXD06 | 0.158 | -0.422 |
| BXD07 | -0.412 | -1.206 |
| BXD08 | -0.032 | -1.756 |
| BXD09 | -0.171 | -1.551 |
| CAST | -0.067 | -0.337 |
| CCcont | -0.856 | -2.382 |
| DS01 | -0.034 | -0.407 |
| DS02 | 0.274 | -0.375 |
| DS04 | 0.457 | 0.852 |
| DS0c | -1.037 | -1.475 |
| GP01 | -1.749 | -1.575 |
| GP02 | 0.091 | -1.244 |
| GP0c | -1.158 | -0.884 |
| NOD | 0.622 | 0.0 |
| NZO | 0.192 | 0.131 |
| PWK | 0.198 | 0.171 |
| H37Rv_KO_CtpC | -0.155 | -0.37 |
| H37Rv_KO_CtpD | -1.412 | -1.103 |
| H37Rv_KO_Rv1272 | -1.496 | -0.362 |
| H37Rv_KO_SugABC | -0.387 | -1.391 |
| H37Rv_KO_MbtN | -2.332 | -1.011 |
| Trans05 | 0.436 | 0.667 |
| macrophage_unactivated | -0.341 | -0.701 |
| IL1 | 0.225 | -0.427 |
| Rapamycin | -1.353 | -1.795 |
| Tcell | 0.192 | -1.277 |
| GMCSF | -0.092 | -1.035 |
| IFNab | -0.647 | -1.466 |
| IFNg | 0.203 | -2.494 |
| IFNg_GMCSF1 | -0.427 | 0.412 |
| Rv1432_day32 | 2.241 | 0.583 |
| Rv1565c_day32 | 0.49 | 0.338 |
| secA2_input | 0.831 | -0.238 |
| delta_Rv3594 | 1.152 | 1.19 |
| delta_Rv3717 | 0.415 | 0.901 |
| delta_Rv3811 | 0.232 | -0.159 |
| delta_Rv0954 | 1.644 | 0.57 |
| PonA1 | 0.201 | 0.594 |
| EccD1_KO | 0.898 | 0.187 |
| EspI_KO | -0.83 | -0.342 |
| PE35_KO | -0.038 | 1.17 |
| PPE68_KO | 0.08 | 0.841 |
| glycerol2 | -1.607 | -1.244 |
| lignocerate | -1.677 | -1.587 |
| oleate | -1.007 | -0.885 |
| phosphatidylcholine | -1.542 | -0.637 |
| acetate | -3.157 | -1.14 |
| glucAc | -1.405 | -1.952 |
| Rv0950ko | -0.133 | -0.395 |
| Rv1096ko | 0.691 | -0.609 |
| Rv3684ko | -0.557 | 0.58 |
| delta_otsA_trehalose | -0.286 | -0.111 |