Top 10 genes with highest correlation to Rv0395/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2290/lppO | (cc=0.4786) | info on Rv2290/lppO |
| Rv0233/nrdB | (cc=0.4725) | info on Rv0233/nrdB |
| Rv3714c/- | (cc=0.469) | info on Rv3714c/- |
| Rv0817c/- | (cc=0.4621) | info on Rv0817c/- |
| Rv2994/- | (cc=0.4579) | info on Rv2994/- |
| Rv0526/- | (cc=0.4498) | info on Rv0526/- |
| Rv0885/- | (cc=0.4489) | info on Rv0885/- |
| Rv0677c/mmpS5 | (cc=0.4464) | info on Rv0677c/mmpS5 |
| Rv3248c/sahH | (cc=0.4456) | info on Rv3248c/sahH |
| Rv0889c/citA | (cc=0.4421) | info on Rv0889c/citA |
Correlation of Rv0395/- with Rv2290/lppO
Normalized LFCs for Rv0395/-:
(description and provenance of datasets)
| Rv0395/- | Rv2290/lppO | |
| Fe_supp_jason_reseq | -0.63 | 0.537 |
| low_pH_jason_reseq | 0.81 | -0.182 |
| NO_jason_reseq | 0.326 | -0.06 |
| B6_jason_reseq | 0.944 | 0.398 |
| MHCII_jason_reseq | 1.404 | 0.099 |
| Isoniazid02 | -0.051 | -0.336 |
| Rifampicin4 | -0.555 | -1.064 |
| Ethambutol3 | -0.855 | -0.545 |
| Meropenem3 | 0.455 | -0.736 |
| Vancomycin16 | -0.414 | -0.438 |
| Rv2680_day32 | 0.366 | -0.222 |
| H37Rv_KO_MarP | 0.246 | 0.792 |
| hypoxia_3wks | 1.009 | 0.0 |
| hypoxia_6wks | 0.121 | 0.167 |
| glycerol | -2.722 | -0.012 |
| cholesterol | -1.903 | -0.244 |
| AJ | 0.119 | 0.027 |
| Bibs02 | 0.559 | 0.813 |
| Bibs02c | 0.691 | 0.129 |
| BL6 | 0.121 | 0.556 |
| BL6a | 0.276 | 0.288 |
| BXD01 | 0.301 | -0.892 |
| BXD010 | -0.734 | 0.448 |
| BXD011 | 0.0 | 0.75 |
| BXD03 | 0.082 | 0.257 |
| BXD04 | -1.06 | 0.135 |
| BXD05 | -0.053 | 0.658 |
| BXD06 | 0.158 | 0.075 |
| BXD07 | -0.412 | 0.07 |
| BXD08 | -0.032 | 0.008 |
| BXD09 | -0.171 | 0.358 |
| CAST | -0.067 | -0.312 |
| CCcont | -0.856 | -0.026 |
| DS01 | -0.034 | 0.014 |
| DS02 | 0.274 | -0.309 |
| DS04 | 0.457 | 0.011 |
| DS0c | -1.037 | -0.366 |
| GP01 | -1.749 | 0.26 |
| GP02 | 0.091 | 0.0 |
| GP0c | -1.158 | -0.57 |
| NOD | 0.622 | 0.592 |
| NZO | 0.192 | -0.107 |
| PWK | 0.198 | -0.117 |
| H37Rv_KO_CtpC | -0.155 | 0.228 |
| H37Rv_KO_CtpD | -1.412 | -0.867 |
| H37Rv_KO_Rv1272 | -1.496 | -0.421 |
| H37Rv_KO_SugABC | -0.387 | 0.271 |
| H37Rv_KO_MbtN | -2.332 | 0.253 |
| Trans05 | 0.436 | -0.331 |
| macrophage_unactivated | -0.341 | -0.123 |
| IL1 | 0.225 | -0.442 |
| Rapamycin | -1.353 | -0.264 |
| Tcell | 0.192 | -0.652 |
| GMCSF | -0.092 | 0.214 |
| IFNab | -0.647 | -0.408 |
| IFNg | 0.203 | 0.102 |
| IFNg_GMCSF1 | -0.427 | 1.59 |
| Rv1432_day32 | 2.241 | 0.332 |
| Rv1565c_day32 | 0.49 | 0.302 |
| secA2_input | 0.831 | -0.935 |
| delta_Rv3594 | 1.152 | 1.213 |
| delta_Rv3717 | 0.415 | 0.339 |
| delta_Rv3811 | 0.232 | 0.663 |
| delta_Rv0954 | 1.644 | -0.09 |
| PonA1 | 0.201 | 0.436 |
| EccD1_KO | 0.898 | 0.556 |
| EspI_KO | -0.83 | 0.311 |
| PE35_KO | -0.038 | 1.0 |
| PPE68_KO | 0.08 | 0.621 |
| glycerol2 | -1.607 | -1.833 |
| lignocerate | -1.677 | -2.314 |
| oleate | -1.007 | -1.733 |
| phosphatidylcholine | -1.542 | -2.438 |
| acetate | -3.157 | -3.262 |
| glucAc | -1.405 | -1.611 |
| Rv0950ko | -0.133 | 0.537 |
| Rv1096ko | 0.691 | -0.588 |
| Rv3684ko | -0.557 | -0.743 |
| delta_otsA_trehalose | -0.286 | -0.472 |