Top 10 genes with highest correlation to Rv0394c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3812/PE_PGRS62 | (cc=0.5205) | info on Rv3812/PE_PGRS62 |
| Rv2882c/frr | (cc=0.5033) | info on Rv2882c/frr |
| Rv3749c/- | (cc=0.4612) | info on Rv3749c/- |
| Rv0213c/- | (cc=0.461) | info on Rv0213c/- |
| Rv0701/rplC | (cc=0.4604) | info on Rv0701/rplC |
| Rv3673c/- | (cc=0.4545) | info on Rv3673c/- |
| Rv0741/- | (cc=0.4512) | info on Rv0741/- |
| Rv0615/- | (cc=0.4489) | info on Rv0615/- |
| Rv1641/infC | (cc=0.4398) | info on Rv1641/infC |
| Rv0552/- | (cc=0.4349) | info on Rv0552/- |
Correlation of Rv0394c/- with Rv2882c/frr
Normalized LFCs for Rv0394c/-:
(description and provenance of datasets)
| Rv0394c/- | Rv2882c/frr | |
| Fe_supp_jason_reseq | -0.403 | 0.0 |
| low_pH_jason_reseq | 0.276 | 0.0 |
| NO_jason_reseq | 0.877 | 0.0 |
| B6_jason_reseq | 0.854 | 0.0 |
| MHCII_jason_reseq | 1.06 | 0.0 |
| Isoniazid02 | -0.275 | -0.201 |
| Rifampicin4 | -0.322 | 0.341 |
| Ethambutol3 | -0.816 | 0.293 |
| Meropenem3 | -0.854 | 0.0 |
| Vancomycin16 | -0.348 | 0.923 |
| Rv2680_day32 | 0.345 | 0.0 |
| H37Rv_KO_MarP | 0.895 | 0.371 |
| hypoxia_3wks | 0.311 | 0.0 |
| hypoxia_6wks | 0.503 | 0.0 |
| glycerol | -0.396 | -0.202 |
| cholesterol | 0.226 | -0.145 |
| AJ | 0.121 | 0.212 |
| Bibs02 | 0.16 | -0.183 |
| Bibs02c | 0.071 | 0.527 |
| BL6 | 0.227 | -0.125 |
| BL6a | -0.016 | -0.198 |
| BXD01 | -0.337 | -0.13 |
| BXD010 | -0.096 | -0.128 |
| BXD011 | -0.481 | -0.127 |
| BXD03 | 0.246 | 0.0 |
| BXD04 | -0.887 | -0.124 |
| BXD05 | 0.046 | -0.135 |
| BXD06 | -0.275 | 0.762 |
| BXD07 | -0.027 | -0.138 |
| BXD08 | 0.19 | -0.133 |
| BXD09 | -0.427 | -0.14 |
| CAST | 0.637 | -0.23 |
| CCcont | -0.745 | -0.149 |
| DS01 | -0.178 | -0.236 |
| DS02 | -0.05 | -0.217 |
| DS04 | -0.863 | -0.194 |
| DS0c | 0.25 | 0.0 |
| GP01 | -0.103 | -0.099 |
| GP02 | 0.031 | -0.083 |
| GP0c | -0.932 | -0.13 |
| NOD | 0.737 | -0.225 |
| NZO | 0.14 | 0.182 |
| PWK | 0.095 | 1.009 |
| H37Rv_KO_CtpC | -0.365 | -0.162 |
| H37Rv_KO_CtpD | -0.417 | -0.127 |
| H37Rv_KO_Rv1272 | -0.311 | -0.141 |
| H37Rv_KO_SugABC | 0.86 | -0.099 |
| H37Rv_KO_MbtN | -0.016 | -0.103 |
| Trans05 | -0.814 | -0.131 |
| macrophage_unactivated | -0.514 | 0.0 |
| IL1 | -1.498 | 0.0 |
| Rapamycin | -0.945 | 0.0 |
| Tcell | 1.18 | 0.0 |
| GMCSF | -1.154 | 0.0 |
| IFNab | -1.484 | 0.0 |
| IFNg | -0.19 | 0.0 |
| IFNg_GMCSF1 | 0.047 | 0.0 |
| Rv1432_day32 | -0.206 | 0.0 |
| Rv1565c_day32 | 0.182 | 0.0 |
| secA2_input | -0.113 | 0.568 |
| delta_Rv3594 | -0.237 | -0.176 |
| delta_Rv3717 | -0.195 | -0.477 |
| delta_Rv3811 | -0.935 | -0.564 |
| delta_Rv0954 | 0.012 | -0.49 |
| PonA1 | 0.389 | -0.437 |
| EccD1_KO | -1.22 | -2.519 |
| EspI_KO | -1.586 | -2.185 |
| PE35_KO | -1.377 | -2.234 |
| PPE68_KO | -2.093 | -2.451 |
| glycerol2 | -0.062 | 0.0 |
| lignocerate | -0.054 | 0.0 |
| oleate | -0.259 | 0.0 |
| phosphatidylcholine | -0.092 | 0.0 |
| acetate | -0.135 | 0.0 |
| glucAc | -0.397 | 0.0 |
| Rv0950ko | 0.416 | 1.462 |
| Rv1096ko | 0.63 | 1.143 |
| Rv3684ko | 0.37 | 0.0 |
| delta_otsA_trehalose | 0.038 | 0.0 |