Top 10 genes with highest correlation to Rv0394c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3812/PE_PGRS62 | (cc=0.5205) | info on Rv3812/PE_PGRS62 |
| Rv2882c/frr | (cc=0.5033) | info on Rv2882c/frr |
| Rv3749c/- | (cc=0.4612) | info on Rv3749c/- |
| Rv0213c/- | (cc=0.461) | info on Rv0213c/- |
| Rv0701/rplC | (cc=0.4604) | info on Rv0701/rplC |
| Rv3673c/- | (cc=0.4545) | info on Rv3673c/- |
| Rv0741/- | (cc=0.4512) | info on Rv0741/- |
| Rv0615/- | (cc=0.4489) | info on Rv0615/- |
| Rv1641/infC | (cc=0.4398) | info on Rv1641/infC |
| Rv0552/- | (cc=0.4349) | info on Rv0552/- |
Correlation of Rv0394c/- with Rv3812/PE_PGRS62
Normalized LFCs for Rv0394c/-:
(description and provenance of datasets)
| Rv0394c/- | Rv3812/PE_PGRS62 | |
| Fe_supp_jason_reseq | -0.403 | 0.186 |
| low_pH_jason_reseq | 0.276 | -0.512 |
| NO_jason_reseq | 0.877 | -0.076 |
| B6_jason_reseq | 0.854 | 0.253 |
| MHCII_jason_reseq | 1.06 | 0.593 |
| Isoniazid02 | -0.275 | -0.899 |
| Rifampicin4 | -0.322 | 0.179 |
| Ethambutol3 | -0.816 | -0.293 |
| Meropenem3 | -0.854 | -0.557 |
| Vancomycin16 | -0.348 | -0.602 |
| Rv2680_day32 | 0.345 | -0.414 |
| H37Rv_KO_MarP | 0.895 | 0.405 |
| hypoxia_3wks | 0.311 | 0.084 |
| hypoxia_6wks | 0.503 | 0.186 |
| glycerol | -0.396 | -0.562 |
| cholesterol | 0.226 | -0.207 |
| AJ | 0.121 | 0.763 |
| Bibs02 | 0.16 | 0.772 |
| Bibs02c | 0.071 | 0.884 |
| BL6 | 0.227 | 0.192 |
| BL6a | -0.016 | 0.449 |
| BXD01 | -0.337 | 0.047 |
| BXD010 | -0.096 | -0.006 |
| BXD011 | -0.481 | 0.035 |
| BXD03 | 0.246 | 0.136 |
| BXD04 | -0.887 | -0.358 |
| BXD05 | 0.046 | 1.032 |
| BXD06 | -0.275 | 0.06 |
| BXD07 | -0.027 | 0.019 |
| BXD08 | 0.19 | 0.03 |
| BXD09 | -0.427 | -0.026 |
| CAST | 0.637 | 0.581 |
| CCcont | -0.745 | 0.2 |
| DS01 | -0.178 | 0.878 |
| DS02 | -0.05 | 0.83 |
| DS04 | -0.863 | 0.878 |
| DS0c | 0.25 | 0.786 |
| GP01 | -0.103 | -0.298 |
| GP02 | 0.031 | -0.068 |
| GP0c | -0.932 | -0.22 |
| NOD | 0.737 | 0.583 |
| NZO | 0.14 | 0.546 |
| PWK | 0.095 | 0.408 |
| H37Rv_KO_CtpC | -0.365 | -0.452 |
| H37Rv_KO_CtpD | -0.417 | 0.76 |
| H37Rv_KO_Rv1272 | -0.311 | 0.34 |
| H37Rv_KO_SugABC | 0.86 | 0.55 |
| H37Rv_KO_MbtN | -0.016 | -0.169 |
| Trans05 | -0.814 | -0.152 |
| macrophage_unactivated | -0.514 | -0.253 |
| IL1 | -1.498 | -1.474 |
| Rapamycin | -0.945 | -0.997 |
| Tcell | 1.18 | 1.124 |
| GMCSF | -1.154 | -1.352 |
| IFNab | -1.484 | -1.14 |
| IFNg | -0.19 | -1.251 |
| IFNg_GMCSF1 | 0.047 | -0.591 |
| Rv1432_day32 | -0.206 | -0.156 |
| Rv1565c_day32 | 0.182 | 0.33 |
| secA2_input | -0.113 | 0.169 |
| delta_Rv3594 | -0.237 | 0.496 |
| delta_Rv3717 | -0.195 | -0.112 |
| delta_Rv3811 | -0.935 | 1.081 |
| delta_Rv0954 | 0.012 | 0.05 |
| PonA1 | 0.389 | -0.028 |
| EccD1_KO | -1.22 | -0.25 |
| EspI_KO | -1.586 | -0.921 |
| PE35_KO | -1.377 | -0.624 |
| PPE68_KO | -2.093 | -0.419 |
| glycerol2 | -0.062 | 0.056 |
| lignocerate | -0.054 | 0.247 |
| oleate | -0.259 | 0.176 |
| phosphatidylcholine | -0.092 | 0.056 |
| acetate | -0.135 | 0.57 |
| glucAc | -0.397 | 0.195 |
| Rv0950ko | 0.416 | 0.115 |
| Rv1096ko | 0.63 | 0.338 |
| Rv3684ko | 0.37 | -0.065 |
| delta_otsA_trehalose | 0.038 | 0.433 |