Top 10 genes with highest correlation to Rv0376c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3366/spoU | (cc=0.5989) | info on Rv3366/spoU |
| Rv3897c/- | (cc=0.5866) | info on Rv3897c/- |
| Rv3705A/- | (cc=0.5554) | info on Rv3705A/- |
| Rv0887c/- | (cc=0.5547) | info on Rv0887c/- |
| Rv0593/lprL | (cc=0.5537) | info on Rv0593/lprL |
| Rv2625c/- | (cc=0.5517) | info on Rv2625c/- |
| Rv0359/- | (cc=0.5513) | info on Rv0359/- |
| Rv3295/- | (cc=0.5507) | info on Rv3295/- |
| Rv0379/secE2 | (cc=0.5506) | info on Rv0379/secE2 |
| Rv0079/- | (cc=0.5445) | info on Rv0079/- |
Correlation of Rv0376c/- with Rv0887c/-
Normalized LFCs for Rv0376c/-:
(description and provenance of datasets)
| Rv0376c/- | Rv0887c/- | |
| Fe_supp_jason_reseq | -0.63 | 0.415 |
| low_pH_jason_reseq | -1.325 | -0.599 |
| NO_jason_reseq | -0.795 | 2.392 |
| B6_jason_reseq | -0.028 | 2.335 |
| MHCII_jason_reseq | -0.012 | 2.223 |
| Isoniazid02 | -0.518 | 0.304 |
| Rifampicin4 | 0.208 | 0.051 |
| Ethambutol3 | -0.411 | -0.381 |
| Meropenem3 | 0.008 | 0.781 |
| Vancomycin16 | -0.175 | 1.666 |
| Rv2680_day32 | -0.134 | -0.413 |
| H37Rv_KO_MarP | 0.415 | 0.0 |
| hypoxia_3wks | -0.223 | -1.475 |
| hypoxia_6wks | 0.524 | -0.382 |
| glycerol | 0.607 | 0.541 |
| cholesterol | 0.238 | 0.71 |
| AJ | 0.481 | 0.138 |
| Bibs02 | 0.706 | 0.0 |
| Bibs02c | 0.252 | 1.035 |
| BL6 | 0.311 | -0.935 |
| BL6a | -0.139 | 0.36 |
| BXD01 | -0.309 | -0.542 |
| BXD010 | -0.717 | -2.717 |
| BXD011 | -0.695 | -1.316 |
| BXD03 | -0.49 | -2.012 |
| BXD04 | -0.39 | -0.048 |
| BXD05 | 0.655 | -0.545 |
| BXD06 | -0.868 | -1.152 |
| BXD07 | -0.735 | -1.677 |
| BXD08 | -0.706 | -1.219 |
| BXD09 | -0.982 | -1.702 |
| CAST | 0.242 | 0.185 |
| CCcont | -0.752 | 0.183 |
| DS01 | 0.828 | 0.577 |
| DS02 | 1.15 | 1.712 |
| DS04 | -0.32 | 0.087 |
| DS0c | 0.812 | 1.684 |
| GP01 | 0.081 | -1.0 |
| GP02 | -0.097 | -1.673 |
| GP0c | -0.41 | -0.714 |
| NOD | 0.418 | -0.412 |
| NZO | -0.432 | -0.785 |
| PWK | -0.102 | 0.24 |
| H37Rv_KO_CtpC | -0.352 | 0.061 |
| H37Rv_KO_CtpD | -0.691 | -1.885 |
| H37Rv_KO_Rv1272 | -0.81 | -0.464 |
| H37Rv_KO_SugABC | -1.064 | 0.306 |
| H37Rv_KO_MbtN | -0.756 | -1.749 |
| Trans05 | 0.167 | -3.216 |
| macrophage_unactivated | -1.234 | -1.098 |
| IL1 | -0.632 | -0.572 |
| Rapamycin | -0.786 | -3.397 |
| Tcell | -0.495 | 0.401 |
| GMCSF | -0.454 | -0.668 |
| IFNab | -1.327 | -1.466 |
| IFNg | -0.684 | -2.673 |
| IFNg_GMCSF1 | -1.084 | -1.304 |
| Rv1432_day32 | -0.481 | 0.0 |
| Rv1565c_day32 | 0.676 | -0.398 |
| secA2_input | 1.061 | -1.461 |
| delta_Rv3594 | -0.159 | 1.337 |
| delta_Rv3717 | 0.292 | 1.495 |
| delta_Rv3811 | 0.449 | 3.062 |
| delta_Rv0954 | 0.425 | 2.013 |
| PonA1 | 1.338 | 2.604 |
| EccD1_KO | -0.947 | -0.895 |
| EspI_KO | -0.097 | -0.776 |
| PE35_KO | -0.382 | 0.831 |
| PPE68_KO | -0.419 | -0.374 |
| glycerol2 | 0.395 | 2.844 |
| lignocerate | 0.958 | 3.288 |
| oleate | 0.432 | -0.179 |
| phosphatidylcholine | 0.64 | 2.962 |
| acetate | 0.826 | 3.586 |
| glucAc | 0.974 | 2.946 |
| Rv0950ko | 1.505 | 1.251 |
| Rv1096ko | 1.972 | 1.921 |
| Rv3684ko | 2.06 | 1.294 |
| delta_otsA_trehalose | -1.522 | -1.092 |