Top 10 genes with highest correlation to Rv0376c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3366/spoU | (cc=0.5989) | info on Rv3366/spoU |
| Rv3897c/- | (cc=0.5866) | info on Rv3897c/- |
| Rv3705A/- | (cc=0.5554) | info on Rv3705A/- |
| Rv0887c/- | (cc=0.5547) | info on Rv0887c/- |
| Rv0593/lprL | (cc=0.5537) | info on Rv0593/lprL |
| Rv2625c/- | (cc=0.5517) | info on Rv2625c/- |
| Rv0359/- | (cc=0.5513) | info on Rv0359/- |
| Rv3295/- | (cc=0.5507) | info on Rv3295/- |
| Rv0379/secE2 | (cc=0.5506) | info on Rv0379/secE2 |
| Rv0079/- | (cc=0.5445) | info on Rv0079/- |
Correlation of Rv0376c/- with Rv0593/lprL
Normalized LFCs for Rv0376c/-:
(description and provenance of datasets)
| Rv0376c/- | Rv0593/lprL | |
| Fe_supp_jason_reseq | -0.63 | -0.45 |
| low_pH_jason_reseq | -1.325 | 0.417 |
| NO_jason_reseq | -0.795 | -0.131 |
| B6_jason_reseq | -0.028 | -0.22 |
| MHCII_jason_reseq | -0.012 | 0.047 |
| Isoniazid02 | -0.518 | -1.807 |
| Rifampicin4 | 0.208 | -0.655 |
| Ethambutol3 | -0.411 | 1.285 |
| Meropenem3 | 0.008 | -0.883 |
| Vancomycin16 | -0.175 | -1.257 |
| Rv2680_day32 | -0.134 | -0.24 |
| H37Rv_KO_MarP | 0.415 | 0.069 |
| hypoxia_3wks | -0.223 | -0.271 |
| hypoxia_6wks | 0.524 | -0.407 |
| glycerol | 0.607 | 0.331 |
| cholesterol | 0.238 | 0.866 |
| AJ | 0.481 | 0.432 |
| Bibs02 | 0.706 | -0.049 |
| Bibs02c | 0.252 | 0.693 |
| BL6 | 0.311 | -0.525 |
| BL6a | -0.139 | 0.152 |
| BXD01 | -0.309 | -0.617 |
| BXD010 | -0.717 | -0.423 |
| BXD011 | -0.695 | -0.331 |
| BXD03 | -0.49 | -0.447 |
| BXD04 | -0.39 | 0.0 |
| BXD05 | 0.655 | 0.035 |
| BXD06 | -0.868 | -0.425 |
| BXD07 | -0.735 | -0.441 |
| BXD08 | -0.706 | -0.361 |
| BXD09 | -0.982 | -0.365 |
| CAST | 0.242 | 0.234 |
| CCcont | -0.752 | -0.227 |
| DS01 | 0.828 | -0.265 |
| DS02 | 1.15 | 0.87 |
| DS04 | -0.32 | 0.067 |
| DS0c | 0.812 | 0.514 |
| GP01 | 0.081 | -0.009 |
| GP02 | -0.097 | 0.386 |
| GP0c | -0.41 | 0.193 |
| NOD | 0.418 | 0.135 |
| NZO | -0.432 | 0.137 |
| PWK | -0.102 | 0.533 |
| H37Rv_KO_CtpC | -0.352 | -0.441 |
| H37Rv_KO_CtpD | -0.691 | -0.896 |
| H37Rv_KO_Rv1272 | -0.81 | -0.158 |
| H37Rv_KO_SugABC | -1.064 | 0.592 |
| H37Rv_KO_MbtN | -0.756 | 0.105 |
| Trans05 | 0.167 | -0.713 |
| macrophage_unactivated | -1.234 | -1.177 |
| IL1 | -0.632 | -0.261 |
| Rapamycin | -0.786 | -0.509 |
| Tcell | -0.495 | -0.593 |
| GMCSF | -0.454 | -0.153 |
| IFNab | -1.327 | -0.701 |
| IFNg | -0.684 | -1.096 |
| IFNg_GMCSF1 | -1.084 | -0.946 |
| Rv1432_day32 | -0.481 | -0.933 |
| Rv1565c_day32 | 0.676 | 0.212 |
| secA2_input | 1.061 | 1.188 |
| delta_Rv3594 | -0.159 | 0.352 |
| delta_Rv3717 | 0.292 | 0.668 |
| delta_Rv3811 | 0.449 | 0.364 |
| delta_Rv0954 | 0.425 | 0.355 |
| PonA1 | 1.338 | 0.448 |
| EccD1_KO | -0.947 | -0.181 |
| EspI_KO | -0.097 | -0.898 |
| PE35_KO | -0.382 | -0.458 |
| PPE68_KO | -0.419 | -0.957 |
| glycerol2 | 0.395 | 0.531 |
| lignocerate | 0.958 | 0.933 |
| oleate | 0.432 | 0.099 |
| phosphatidylcholine | 0.64 | 0.606 |
| acetate | 0.826 | 0.75 |
| glucAc | 0.974 | 0.588 |
| Rv0950ko | 1.505 | 0.434 |
| Rv1096ko | 1.972 | 0.832 |
| Rv3684ko | 2.06 | 0.851 |
| delta_otsA_trehalose | -1.522 | -0.118 |